Job Description P62620 Confidence 42.57% Date Thu Jan 5 12:07:43 GMT 2012 Rank 447 Aligned Residues 194 % Identity 14% Template c3cwoX_ PDB info PDB header:de novo protein Chain: X: PDB Molecule:beta/alpha-barrel protein based on 1thf and 1tmy; PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds Resolution 3.10 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		I	V	R	V	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	.	.	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		T	M	D	I	T	M	P	E	M	N	G	I	D	A	I	K	E	I	M	K	I	D	P	N	A	K	I	I	V	C	S	A	M	G	Q	Q	A	M	V	I	E	A	I	K	A	G	A	K	D	F	I	V	N	T	A	A	V	E	N	P	S	L	I	T	Q	I	A	Q	T	F	G	S	Q	A	V	V	V	A	I	D
Template Known Secondary structure							S	T	T	S	S												S	S	S									S	S	T										T	T							S							T											T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	.	.	.	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G
Query Conservation																																														.	.	.
Alig confidence																					.	.	.																							.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Sequence		A	K	R	V	D	G	E	F	M	V	F	T	Y	S	G	K	K	N	T	.	.	.	G	I	L	L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	D	T	E	M	I	R	F	V	R	P	L	T	T	L	P	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S	S							T	T	T	T				.	.	.															T		S							T	T	T	T	T			S											G	G	G			S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I	R	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	A	G	A	D	A	A	L	A	A	S	V	F	H	F	R	E	I	D	V	R	E	L	K	E	Y	L	K	K	H	G	V	N	V	R
Template Known Secondary structure					S				S											T		S					S					T	T	S	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions