Job Description P62620 Confidence 91.95% Date Thu Jan 5 12:07:43 GMT 2012 Rank 195 Aligned Residues 202 % Identity 15% Template c3c6cA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme; PDBTitle: crystal structure of a putative 3-keto-5-aminohexanoate cleavage2 enzyme (reut_c6226) from ralstonia eutropha jmp134 at 1.72 a3 resolution Resolution 1.72 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.											.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.																						.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	.	.	.	.	.	.	.	.	.	.	A	E	A	F	K	L	I	K	Q	Q	.	V	N	V	P	L	V	A	D	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F
Query Conservation																													.	.	.	.	.	.	.	.	.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	I	A	D	A	C	V	E	A	A	K	A	G	A	S	V	A	H	I	H	V	R	D	P	K	T	G	G	G	S	R	D	P	V	L	F	K	E	V	V	D	R	V	R	S	S	G	T	D	I	V	L	N	L	T	C	G	L	G	A	F	L	L	P	D	P	E	D	E	S	K	A	L	P	E	S	D	V	V
Template Known Secondary structure															T		S									T	T	T																			T	T	T												S							T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110			.	.	.											.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure													.											.	.				.	.	.	.	.	.	.	.	.	.
Query SS confidence													.											.	.				.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	R	I	A	L	K	V	A	E	Y	.	G	V	D	C	L	R	I	N	P	G	.	.	N	I	G	.	.	.	.	.	.	.	.	.	.	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A
Query Conservation													.											.	.				.	.	.	.	.	.	.	.	.	.
Alig confidence													.											.	.				.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template Sequence		P	V	A	E	R	V	K	H	L	E	D	C	L	P	E	I	A	S	L	D	I	T	T	G	N	Q	V	E	G	K	L	E	F	V	Y	L	N	T	T	R	T	L	R	A	X	A	R	R	F	Q	E	L	G	I	K	P	E	L	E	V	.	.	.	.	.	.	.	.	.	.	.	.	F	S	P	.	.	.	.	G
Template Known Secondary structure							T									S														T	T																							T								.	.	.	.	.	.	.	.	.	.	.	.	S	S		.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.													.	170	.					.
		157	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		L	L	E	S	A	M	R	H	V	D	H	.	.	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L	S	E	G	I	G	D
Query Conservation													.	.
Alig confidence													.	.															.
Template Conservation																													.
Template Sequence		D	I	L	F	G	K	Q	L	I	E	E	G	L	I	D	G	V	P	L	F	Q	X	V	L	G	V	L	.	W	G	A	P	A	S	T	E	T	X	I	Y	Q	R	N	L	I	P	A	N	A	Q	W	A	A	F	G	I	G	R	D	Q	X	P	X	X	A	Q	A	A	L	L	G	G	N	V	R	V	G	L	E	D
Template Known Secondary structure												T	T		S		S	S								S		T	.	T	S			S										T	T	S		T	T	S								G	G	G												T		B				S	T	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		235	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		T	L	R	V	S	L	A	.	.	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		N	L	Y	L	S	R	G	V	F	A	T	N	G	Q	L	V	E	R	A	R	T	V	I	E	H	L	G	X
Template Known Secondary structure							T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions