Job Description P62620 Confidence 36.92% Date Thu Jan 5 12:07:43 GMT 2012 Rank 477 Aligned Residues 154 % Identity 14% Template c3bleA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate Resolution 2.00 Å

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		40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.															.	.																	.	.	.	.	.	.	.
Query SS confidence													.															.	.																	.	.	.	.	.	.	.
Query Sequence		D	V	E	A	T	V	N	Q	I	K	A	.	L	E	R	V	G	A	D	I	V	R	V	S	V	P	.	.	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	.	.	.	.	.	.	.	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P
Query Conservation													.															.	.																	.	.	.	.	.	.	.
Alig confidence													.															.	.																	.	.	.	.	.	.	.									.
Template Conservation																																																													.
Template Sequence		S	T	S	E	K	L	N	I	A	K	F	L	L	Q	K	L	N	V	D	R	V	E	I	A	S	A	R	V	S	K	G	E	L	E	T	V	Q	K	I	M	E	W	A	A	T	E	Q	L	T	E	R	I	E	I	L	G	F	V	D	.	G	N	K	T	V	D	W	I	K	D	S	G	A	K	V	L	N	L	L	T
Template Known Secondary structure																T	T			S							T	T	S		T	T															T	T		G	G	G							S	S	.	T	T										T
Template Predicted Secondary structure																																																													.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		110									.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.					.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.					.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	N	I	G	N	.	.	.	.	.	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F
Query Conservation			.	.	.	.	.	.	.	.					.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.					.	.	.	.	.																							.	.	.	.	.	.										.												.	.	.	.
Template Conservation																																										.	.	.	.	.	.										.												.	.	.	.
Template Sequence		K	G	S	L	H	H	L	E	K	Q	L	G	K	T	P	K	E	F	F	T	D	V	S	F	V	I	E	Y	A	I	K	S	G	L	K	I	N	V	Y	L	.	.	.	.	.	.	E	D	W	S	N	G	F	R	N	.	S	P	D	Y	V	K	S	L	V	E	H	.	.	.	.	L	S	K	E	H	I	E	R	I
Template Known Secondary structure				S								T																					T	T								.	.	.	.	.	.		T								.												.	.	.	.			T	S			S
Template Predicted Secondary structure																																										.	.	.	.	.	.										.												.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.
		177	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.
Predicted Secondary structure					.	.																					.
Query SS confidence					.	.																					.
Query Sequence		K	V	S	.	.	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	.	D	Q	P	L	H	L
Query Conservation					.	.																					.
Alig confidence					.	.																					.
Template Conservation
Template Sequence		F	L	P	D	T	L	G	V	L	S	P	E	E	T	F	Q	G	V	D	S	L	I	Q	K	Y	P	D	I	H	F	E	F
Template Known Secondary structure						T	T																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions