Job Description P62620 Confidence 97.53% Date Thu Jan 5 12:07:43 GMT 2012 Rank 45 Aligned Residues 213 % Identity 19% Template c2yr1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of 3-dehydroquinate dehydratase from geobacillus2 kaustophilus hta426 Resolution 2.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.
Predicted Secondary structure																																																			.	.	.																			.	.	.	.	.
Query SS confidence																																																			.	.	.																			.	.	.	.	.
Query Sequence		T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	.	.	.	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	.	.	.	.	.	N	V	P	L	V
Query Conservation																																																			.	.	.																			.	.	.	.	.
Alig confidence																															.	.	.																		.	.	.																			.	.	.	.	.
Template Conservation																															.	.	.
Template Sequence		K	A	I	K	V	R	N	I	W	I	G	G	T	E	P	C	I	C	A	P	V	V	G	E	D	D	R	K	V	.	.	.	L	R	E	A	E	E	V	C	R	K	Q	P	D	L	L	E	W	R	A	D	F	F	R	A	I	D	D	Q	E	R	V	L	A	T	A	N	G	L	R	N	I	A	G	E	I	P	I	L
Template Known Secondary structure		S					T	T				S	S	S	S										S	S					.	.	.										S			S						G	G	G		T	T	T	T																	T	T	S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.								.	90								.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.			.	.	.	.	.	.	.												.
Query SS confidence						.	.	.	.	.	.	.			.	.	.	.	.	.	.												.
Query Sequence		A	D	I	H	.	.	.	.	.	.	.	F	D	.	.	.	.	.	.	.	Y	R	I	A	L	K	V	A	E	Y	G	.	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y
Query Conservation						.	.	.	.	.	.	.			.	.	.	.	.	.	.												.
Alig confidence						.	.	.	.	.	.	.			.	.	.	.	.	.	.												.								.	.	.																						.							.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.																						.							.	.	.	.	.	.	.	.	.
Template Sequence		F	T	I	R	S	E	R	E	G	G	Q	P	I	P	L	N	E	A	E	V	R	R	L	I	E	A	I	C	R	S	G	A	I	D	L	V	D	Y	E	.	.	.	L	A	Y	G	E	R	I	A	D	V	R	R	M	T	E	E	C	S	V	W	L	.	V	V	S	R	H	Y	.	.	.	.	.	.	.	.	.	F
Template Known Secondary structure							G	G	G	T					S															T	T	T			S						.	.	.	G	G	G	G	G	G												T				.							.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																									.	.	.																						.							.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.										.
		150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure							.	.																											.	.	.
Query SS confidence							.	.																											.	.	.
Query Sequence		G	E	P	T	P	.	.	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	.	.	.	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L
Query Conservation							.	.																											.	.	.
Alig confidence				.			.	.										.	.	.	.														.	.	.																								.					.	.	.									.	.	.	.	.
Template Conservation				.														.	.	.	.																																								.					.	.	.									.	.	.	.	.
Template Sequence		D	G	.	T	P	R	K	E	T	L	L	A	D	M	R	Q	.	.	.	.	A	E	R	Y	G	A	D	I	A	K	V	A	V	M	P	K	S	P	E	D	V	L	V	L	L	Q	A	T	E	E	A	R	R	E	L	A	I	P	L	.	I	T	M	A	.	.	.	M	G	G	L	G	A	I	T	.	.	.	.	.
Template Known Secondary structure		S		.														.	.	.	.				T	T		S									S	S																			S	S			.					.	.	.		T	T	T	T				.	.	.	.	.
Template Predicted Secondary structure				.														.	.	.	.																																								.					.	.	.									.	.	.	.	.
Template SS confidence
		150	.		.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.				.	.	210	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	A	D	P	V	E	.	.	.	.	.	.	.	E	I	K	V	G	F	D	I	L	K
Query Conservation																								.	.	.	.	.	.	.
Alig confidence		.																						.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	R	L	A	G	W	L	F	G	S	A	V	T	F	A	V	G	N	Q	S	S	A	P	G	Q	I	P	I	D	D	V	R	T	V	L	S	I	L	Q
Template Known Secondary structure		.				G	G	G	G	T	B							S	S	S		S	S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions