Job Description P62620 Confidence 98.92% Date Thu Jan 5 12:07:43 GMT 2012 Rank 27 Aligned Residues 242 % Identity 18% Template c2y5sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. Resolution 1.95 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.											.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	S	T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	.	.	.	.	.	.	.	.	.	.	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		F	L	P	A	P	L	Q	C	G	R	F	E	L	T	F	E	R	P	L	V	M	G	I	L	N	A	T	P	A	R	.	.	D	D	A	L	R	R	A	E	R	M	I	A	E	G	A	D	L	L	D	I	G	G	E	S	T	R	P	G	A	P	P	V	P	L	D	E	E	L	A	R	V	I	P	L	V	E	A	L
Template Known Secondary structure										T	T						S	S													T	.	.	T												T	T		S						S	S			S	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.																											.																																								.	.
Query SS confidence		.	.	.																											.																																								.	.
Query Sequence		.	.	.	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	.	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	.	.	L	Q	E	K	Y	G	E	P	T
Query Conservation		.	.	.																											.																																								.	.
Alig confidence		.	.	.									.																		.							.	.	.	.	.	.																												.	.								.
Template Conservation													.																									.	.	.	.	.	.																																					.
Template Sequence		R	P	L	N	V	P	L	S	I	D	T	.	Y	K	P	A	V	M	R	A	A	L	A	A	G	A	D	L	I	N	D	I	W	G	F	R	.	.	.	.	.	.	Q	P	G	A	I	D	A	V	R	D	G	N	S	G	L	C	A	M	H	M	L	G	E	P	Q	T	M	Q	V	G	E	P	D	Y	G	D	.	V
Template Known Secondary structure		G	G	G		S							.													T		S					T	T	T	T		.	.	.	.	.	.	S	T	T						S	S	S	S												T	T	T	T								S	S	.
Template Predicted Secondary structure													.																									.	.	.	.	.	.																																					.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180						.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.									210	.	.
Predicted Secondary structure																						.	.								.	.	.	.	.				.	.																.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																						.	.								.	.	.	.	.				.	.																.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	.	.	D	Q	F	K	V	S	V	.	.	.	.	.	K	A	S	.	.	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	.	.	.	.	I	D	Q	P	L	H	L	G	I	T	E	.	.	.	.	.	.	.	.	A	G	G
Query Conservation																						.	.								.	.	.	.	.				.	.																.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence																						.	.								.	.	.	.	.				.	.																.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	D	V	R	D	F	L	A	A	R	A	Q	A	L	R	D	A	G	V	A	A	E	R	I	C	V	D	P	G	F	G	F	G	K	A	V	V	D	D	N	Y	A	L	L	A	A	L	P	D	T	A	P	A	R	P	D	G	R	A	Y	P	I	L	A	G	M	S	R	K	S	M	L	G	A	V	I	G	G	K
Template Known Secondary structure																			T	T			G	G	G							T	T	S	S	S		T	T									T	G	G	G	G	S		B		T	T	S	S	B			B					T	T						T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	L	E	R	V	A	A	S	V	A	A	A	L	C	A	V	E	R	G	A	A	I	V	R	V	H	D	V	A	A	T	V	D	A	L	S	V	W	N	A	V	R	A	A	A	R	Q	R
Template Known Secondary structure			G	G	G															T	T		S					S																				T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions