Job Description P62620 Confidence 98.95% Date Thu Jan 5 12:07:43 GMT 2012 Rank 24 Aligned Residues 127 % Identity 20% Template c2v4jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration Resolution 2.10 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																				.											.	.	.	.	.								.	.	.																					.	.	.	.	.	.
Query SS confidence																				.											.	.	.	.	.								.	.	.																					.	.	.	.	.	.
Query Sequence		V	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	.	K	S	L	R	I	R	S	R	G	I	.	.	.	.	.	N	F	I	A	C	P	T	.	.	.	C	S	R	Q	E	F	D	V	I	G	T	V	N	A	L	E	Q	R	L	E	.	.	.	.	.	.	D	I	I	T	P	M	D	V	S	I
Query Conservation																				.											.	.	.	.	.								.	.	.																					.	.	.	.	.	.
Alig confidence																				.											.	.	.	.	.								.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	L	L	G	T	Q	T	P	Q	L	E	E	I	F	F	E	L	T	H	N	L	N	T	D	L	G	G	S	G	S	N	L	R	T	P	E	S	C	L	G	K	S	R	C	E	F	A	C	Y	D	S	Q	A	A	C	Y	E	L	T	M	E	Y	Q	D	E	L	H	R	P	A	F	P	Y	K	F	K	F	K	F
Template Known Secondary structure																						T	S				B				S	S	S	B								G	G	G	S		T	T		S	S													T						S			S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure													.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	C	V	V	N	G	P	G	E	A	.	L	V	S	T	L	G	V	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		D	A	C	P	.	N	G	C	V	A	S	I	A	R	S	D	F	S	V	I	G	T	W	K	D	D	I	K	I	D	A	E	A	V	K	A	Y	V	A	G	E	F	K	P	N	A	G	A	H	S	G	R	D	W	G	K	F	D	I	E	A	E	V	V	N	R	C	P	S	K	C	M	K	W	D	G	S	K	L	S
Template Known Secondary structure			S	S	T	.	T		T	T							S								S	S														T	T	S	S		G	G	G	G	T	T	T	T	S				S							T	G	G	G		T	T							S	S
Template Predicted Secondary structure						.
Template SS confidence
		219	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
																										324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.																	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	K	S	G	L	Y	E	D	G	V	R	K	D	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	N	D	M	I	D	Q	L	E	A	R	I	R	A	K	A	S	Q	L	D	E	A	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	N	K	E	C	V	R	C	M	H	C	I	N	T	M	P	R	A	L	H	I	G	D	E	R	G	A	S	I	L	C	G	A	K	A	P	I	L	D	G	A	Q	M	G	S	L	L	V	P	F	V	A	A	E	E	P	F	D	E	I	K	E	V	V	E	K	I	W	D	W	W	M	E	E	G	K	N	R	E
Template Known Secondary structure				G	G	G					S							T	T	T					S	S										B		S	T	T	T			B													T	T																			S		T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		364	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		378	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions