Job Description P62620 Confidence 78.75% Date Thu Jan 5 12:07:43 GMT 2012 Rank 295 Aligned Residues 132 % Identity 14% Template c2p3eA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus Resolution 1.99 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.		.	.	.
Predicted Secondary structure																.	.																																																.	.	.											.
Query SS confidence																.	.																																																.	.	.											.
Query Sequence		A	T	V	N	Q	I	K	A	L	E	R	V	G	A	.	.	D	I	V	R	V	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	.	.	.	C	L	R	I	N	P	G	N	I	G	.	N	E	E
Query Conservation																.	.																																																.	.	.											.
Alig confidence																.	.																																																.	.	.											.
Template Conservation
Template Sequence		V	S	G	G	E	L	Y	L	A	K	K	A	G	I	P	P	E	R	I	V	Y	A	G	V	G	K	T	E	K	E	L	T	D	A	V	D	S	E	I	L	M	F	N	V	E	S	R	Q	E	L	D	V	L	N	E	I	A	G	K	L	G	K	K	A	R	I	A	I	R	V	N	P	S	K	F	G	V	D	I	R
Template Known Secondary structure		S	S										T	T			G	G	G					S	S													T	T		S																					T														S				G	G
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure														.						.
Query SS confidence														.						.
Query Sequence		R	I	R	M	V	V	D	C	A	R	D	K	.	N	I	P	I	R	.	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V
Query Conservation														.						.
Alig confidence														.						.													.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		E	A	Q	K	E	Y	E	Y	A	S	K	L	E	N	L	E	I	V	G	I	H	C	H	I	G	S	Q	I	L	D	I	.	.	.	.	.	.	S	P	Y	R	E	A	V	E	K	V	V	S	L	Y	E	S	L	T	Q	K	G	F	D	I	K	Y	L	D	I
Template Known Secondary structure		G										T		T	T												S	S	B	S	S		.	.	.	.	.	.	T																			T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions