Job Description P62620 Confidence 89.51% Date Thu Jan 5 12:07:43 GMT 2012 Rank 223 Aligned Residues 168 % Identity 16% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.														.	.	.
Predicted Secondary structure																																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	.	.	.	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	H
Query Conservation																																								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.
Template Sequence		N	P	S	L	I	C	A	P	V	M	A	D	S	I	D	K	M	.	.	.	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	D	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D	E	N
Template Known Secondary structure		S											S	S					.	.	.											T		S						G	G	G		S	S															S	S								B	G	G	G	T	S	S	B		S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	.	.	Q	A	L	L	E	S	A	M	R	H	V	D
Query Conservation																																																																				.	.
Alig confidence																					.	.	.																							.							.	.	.	.	.	.	.	.	.				.			.	.										.	.	.
Template Conservation																					.	.	.																							.							.	.	.	.	.	.	.	.	.				.														.	.	.
Template Sequence		E	R	R	D	V	L	R	L	A	M	E	L	G	A	D	Y	I	D	V	.	.	.	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	.	I	V	S	S	H	N	.	.	.	.	.	.	.	.	.	Y	Q	N	.	T	P	S	V	E	D	L	D	G	L	V	A	R	.	.	.
Template Known Secondary structure													T	T		S					.	.	.												T	T	T				S	S				.							.	.	.	.	.	.	.	.	.	S	S		.														.	.	.
Template Predicted Secondary structure																					.	.	.																							.							.	.	.	.	.	.	.	.	.				.														.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.										.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V
Query Conservation
Alig confidence		.																											.										.					.	.	.
Template Conservation		.																											.										.					.	.	.
Template Sequence		.	I	Q	Q	T	G	A	D	I	V	K	I	A	T	T	A	V	D	I	A	D	V	A	R	M	F	H	.	I	T	S	K	A	Q	V	P	T	.	I	G	L	V	.	.	.	M	G	E	R	G	L	M
Template Known Secondary structure		.				T	T		S									S	S	G	G	G							.						S	S			.					.	.	.		S	G	G	G
Template Predicted Secondary structure		.																											.										.					.	.	.
Template SS confidence
			232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.		.	.	.	270				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions