Job Description P62620 Confidence 44.16% Date Thu Jan 5 12:07:43 GMT 2012 Rank 438 Aligned Residues 139 % Identity 15% Template c2jfzB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of helicobacter pylori glutamate racemase2 in complex with d-glutamate and an inhibitor Resolution 1.86 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	I	G	L	G	L	L	L
Query Conservation
Alig confidence																																								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	T	K	D	P	T	T	I	K	Q	F	G	L	E	A	L	D	F	F	K	P	H	E	I	E	L	L	I	V	A	C	N	T	A	S	A	L	.	.	.	.	A	L	E	E	M	Q	K	Y	S	K	I	P	I	.	.	.	.	.	.	.	.	.	.	.	V	G	V	I	E	P	S	I	L	A	I	K	R	Q
Template Known Secondary structure			T	T	S																	G	G	G	T		S													.	.	.	.	T							T		S	S			.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																								.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.												90	.	.	.	.	.	.	.	.	.	100	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		S	E	G	I	G	D	T	L	R	V	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I	R	S	R	G	I	N	F	I	A	C	P	T	C	S	.	.	.	.	R	Q	E	F	D	V	I	G	T	V	N	A	L	E	Q	R	L	E	D	I	I	T	P	M	D	V	S	I	I	G
Query Conservation																																																.	.	.	.
Alig confidence															.																		.	.														.	.	.	.
Template Conservation															.																		.	.
Template Sequence		V	E	D	K	N	A	P	I	L	V	L	G	T	.	K	A	T	I	Q	S	N	A	Y	D	N	A	L	K	Q	Q	G	.	.	Y	L	N	I	S	H	L	A	T	S	L	F	V	P	L	I	E	E	S	I	L	E	G	E	L	L	E	T	C	M	H	Y	Y	F	T	P	L	E	I	L	P	E	V	I	I	L	G
Template Known Secondary structure					T	T	S								.							T									T	T	.	.										T	T							T	T			S	S												T	T			S			S
Template Predicted Secondary structure															.																		.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		305
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		181

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions