Job Description P62620 Confidence 99.57% Date Thu Jan 5 12:07:43 GMT 2012 Rank 4 Aligned Residues 126 % Identity 25% Template c1zj8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable ferredoxin-dependent nitrite reductase nira; PDBTitle: structure of mycobacterium tuberculosis nira protein Resolution 2.80 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.									.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																														.	.	.	.						.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.						.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		V	S	L	A	A	D	P	V	E	E	I	K	V	G	F	D	I	L	K	S	L	R	I	R	S	R	G	I	.	.	.	.	N	F	I	A	C	.	.	.	P	T	C	S	R	Q	E	F	D	V	I	G	T	V	N	A	L	E	Q	R	L	E	.	.	.	.	.	.	.	.	D	I	I	T	P	M	D	V	S	I
Query Conservation																														.	.	.	.						.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.						.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	I	L	D	I	P	D	A	L	L	D	D	L	I	A	G	L	D	A	L	G	L	Q	S	R	P	S	H	W	R	R	N	L	M	A	C	S	G	I	E	F	C	K	L	S	F	A	E	T	R	V	R	A	Q	H	L	V	P	E	L	E	R	R	L	E	D	I	N	S	Q	L	D	V	P	I	T	V	N	I
Template Known Secondary structure																						T	T		B	S	S													B	T	T	T		T	T		S	S	B																T					T	T			S
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.										.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.												.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	C	V	V	N	G	P	G	E	A	L	V	S	T	L	G	V	T	G	.	.	.	.	.	.	.	.	.	G	N	K	K	S	G	L	Y	E	D	G	V	R	K	D	R	.	.	.	.	.	.	.	.	.	.	.	L	D	N	N	D	M	I	D	Q	L	E	A	R	I	R	A	K	A	S	Q	L	D	E	A
Query Conservation																						.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		N	G	C	P	.	N	S	C	A	R	I	Q	I	A	D	I	G	F	K	G	Q	M	I	D	D	G	H	G	G	S	V	E	G	F	Q	V	H	L	G	G	H	L	G	L	D	A	G	F	G	R	K	L	R	Q	H	K	V	T	S	D	E	L	G	D	Y	I	D	R	V	V	R	N	F	V	K	H	R	S	E	G
Template Known Secondary structure			S	S	T	.	T		T	T		G	G	G	S	S										S	S	S	S											S		B	S	S	T	T		B						T	T					T	T	T															S			T	T
Template Predicted Secondary structure						.
Template SS confidence
		461	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		363	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		540	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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