Job Description P62620 Confidence 96.93% Date Thu Jan 5 12:07:43 GMT 2012 Rank 55 Aligned Residues 141 % Identity 21% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	.	.	.	.	.	.	.	.	.	.	.	.	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.								.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.								.
Template Sequence		T	V	V	K	I	N	D	V	K	F	G	.	.	E	G	F	T	I	I	A	.	G	P	C	S	I	E	S	R	E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	Y	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	G
Template Known Secondary structure							T	T				T	.	.	S	S						.			S	B																	T	T							B	S	S				S	S	T	T	S					T															T
Template Predicted Secondary structure													.	.								.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S
Query Conservation
Alig confidence									.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	T	V	T	E	V	.	M	D	T	R	H	V	E	L	V	A	K	Y	.	S	D	I	L	Q	I	G	A	R	N	S	Q	N	.	.	.	.	F	E	L	L	K	E	V	G	K	V	E	N	P	V	L	L	K	R	G	M	G	.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	Q	E	L	L	Y	S
Template Known Secondary structure									.			G	G	G								.		S						G	G	G	T	T		.	.	.	.								T	T	S	S	S								T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140													.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		A	E	Y	.	.	.	.	I	M	A	Q	G	N	E	N	V	I	L
Template Known Secondary structure					.	.	.	.			T	T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		150	.	.					.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions