Job Description P62620 Confidence 73.68% Date Thu Jan 5 12:07:43 GMT 2012 Rank 312 Aligned Residues 185 % Identity 15% Template c1x7fA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:outer surface protein; PDBTitle: crystal structure of an uncharacterized b. cereus protein Resolution 2.30 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.																	.
Query SS confidence																																																								.	.	.	.																	.
Query Sequence		V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	.	.	.	.	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	.	N	I	G	N	E
Query Conservation																																																								.	.	.	.																	.
Alig confidence																																																	.	.						.	.	.	.																	.		.	.	.	.
Template Conservation																																																	.	.																												.	.	.	.
Template Sequence		K	E	K	D	M	A	Y	I	S	A	A	A	R	H	G	F	S	R	I	F	T	C	L	L	S	V	A	E	F	K	E	I	I	N	H	A	K	D	N	N	M	E	V	I	L	D	V	.	.	A	P	A	V	F	Y	S	D	L	S	F	F	A	E	L	G	A	D	G	I	R	L	D	V	G	F	D	.	.	.	.
Template Known Secondary structure														T	T	T																								T	T								.	.		T	T						T							T		S					S	S			S	.	.	.	.
Template Predicted Secondary structure																																																	.	.																												.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation		.	.														.																																																												.	.
Template Sequence		.	.	G	L	T	E	A	K	M	T	N	N	P	Y	G	.	L	K	I	E	L	N	V	S	N	D	I	A	Y	L	E	N	I	L	S	H	Q	A	N	K	S	A	L	I	G	C	H	N	F	Y	P	Q	K	F	T	G	L	P	Y	D	Y	F	I	R	C	S	E	R	F	K	K	H	G	I	R	.	.	S	A	A
Template Known Secondary structure		.	.	S							T	T		T	T		.							T	T	S		S	S						T	T	S	S			G	G	G								B		S	T	T		S	B															T	T			.	.
Template Predicted Secondary structure		.	.														.																																																												.	.
Template SS confidence
				104	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		V	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L	H	L	G	I	T	E	A	G	G	A	R	S	G	A	V	K	S	A	.	I	G	L	G	L	L	L	S	E	G	I	G	D	T	L	R	V	S	L	A	A	D	P	V	E	E	I	K
Query Conservation																																												.
Alig confidence							.	.	.	.	.	.	.	.	.	.															.	.	.											.
Template Conservation							.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		F	I	T	S	H	.	.	.	.	.	.	.	.	.	.	V	A	N	I	G	P	W	D	I	N	D	G	L	C	.	.	.	T	L	E	E	H	R	N	L	P	I	E	V	Q	A	K	H	L	W	A	T	G	L	I	D	D	V	I	I	G	N	A	Y	A	S	E	E	E	L	E
Template Known Secondary structure						S	.	.	.	.	.	.	.	.	.	.	S			B		S	S	S			S			B	.	.	.	S	B	G	G	G	T	T	S												T	T	S								S	B
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		179	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions