Job Description P62620 Confidence 98.26% Date Thu Jan 5 12:07:43 GMT 2012 Rank 37 Aligned Residues 175 % Identity 20% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.													.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	I	Q	R	R	K	S	T	R	I	Y	V	G	N	V	P	I	G	D	G	A	P	I	A	V	Q	S	M	T	N	T	R	T	T	D	V	E	A	T	V	N	Q	I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	.	.	.	.	.	.	.	.	.	.	.	.	P	T	M	D	A	A	E	A	F
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		L	K	S	E	E	R	R	E	T	V	V	E	V	E	G	V	R	I	G	G	G	S	K	A	V	I	.	.	A	G	P	C	S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	L	G	L	E	G	L	K	L	L
Template Known Secondary structure		B			S	S		S							T	T				B	T	T	B					.	.				S	B																		T		S					B	S	S				S	S	T	T	S					T
Template Predicted Secondary structure																												.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P
Query Conservation
Alig confidence																	.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	A	G	D	E	A	G	L	P	V	V	T	E	V	.	L	D	P	R	H	V	E	T	V	S	R	Y	.	A	D	M	L	Q	I	G	A	R	N	M	Q	N	.	.	.	.	F	P	L	L	R	E	V	G	R	S	G	K	P	V	L	L	K	R	G	F	G	.	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure									T								.			G	G	G								.		S						G	G	G	T	T		.	.	.	.																				T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.													.														.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.													.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	.	.	.	.	.	.	.	K	A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	D	Q	P	L
Query Conservation																														.	.	.	.	.	.	.
Alig confidence													.	.	.	.														.	.	.	.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		T	V	E	E	L	L	A	A	A	E	Y	.	.	.	.	I	L	L	E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E	P	S	T	R	F	T	L	D	V	A	A	V	A	V	L	K	E	A	T	H	L	P	V
Template Known Secondary structure													.	.	.	.				T	T											B			S			S	S	S	S	B													B	S	S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions