Job Description P62620 Confidence 50.49% Date Thu Jan 5 12:07:43 GMT 2012 Rank 402 Aligned Residues 145 % Identity 13% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.											70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.														.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	A	.	.	.	.	.	.	.	.	.	.	E	A	F	K	L	I	K	Q	Q	V	N	.	V	P	L	V	A	D	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D
Query Conservation																								.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	W	E	R	L	R	T	F	R	K	L	M	P	N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	N	D	E	V	V	D	R	F	V	D	K	S	A	E	N	G	M	D
Template Known Secondary structure							T	S			S							T	T								T	S																T	T	S								G	G	G	T	T	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		C	L	R	I	N	P	G	N	I	G	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	.	.	V	K
Query Conservation																																																																														.	.
Alig confidence										.																									.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation										.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	R	V	F	D	A	M	.	N	D	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	.	.	.	.	.	.	.	.	.	.	.	.	C	Y	T	I	S	P	V	H	T	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	S	I	A	L	K	D	M	A	A
Template Known Secondary structure								T	T	.			T													T	T								.	.	.	.	.	.	.	.	.	.	.	.						T	T																T	T		S							T	T
Template Predicted Secondary structure										.																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.													.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		A	S	D	V	F	L	A	V	E	S	Y	R	L	L	A	K	Q	I	.	.	D	Q	P	L	H	L
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		L	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L
Template Known Secondary structure																					T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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