Job Description P62620 Confidence 59.22% Date Thu Jan 5 12:07:43 GMT 2012 Rank 370 Aligned Residues 127 % Identity 20% Template c1njjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:ornithine decarboxylase; PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418 Resolution 2.45 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																							.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	A	L	E	R	V	G	A	D	I	V	R	V	S	V	P	T	M	D	A	A	E	A	F	K	L	I	K	Q	Q	V	N	V	P	L	V	A	D	I	H	F	D	Y	R	I	A	L	K	V	A	E	Y	G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	L
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		L	G	T	L	A	A	L	G	T	.	.	.	G	F	D	C	A	S	N	T	E	I	Q	R	V	R	G	I	G	V	P	P	E	K	I	I	Y	A	N	P	C	K	Q	I	S	H	I	R	Y	A	R	D	S	G	V	D	V	M	T	F	D	C	V	D	E	L	E	K	V	A	K	T	H	P	K	A	K	M	V	L
Template Known Secondary structure								T	T		.	.	.						S										T	T			G	G	G						S	S													T								S												T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		106	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure										.																				.
Query SS confidence										.																				.
Query Sequence		R	I	N	P	G	N	I	G	.	N	E	E	R	I	R	M	V	V	D	C	A	R	D	K	N	I	P	I	.	R	I	G	V	N	A	G	S	L	E	K	D	L	Q	E	K	Y	G	E	P	T	P	Q	A	L	L	E	S	A	M	R	H	V	D	H	L	D	R	L	N	F	D	Q	F	K	V	S	V	K	A	S
Query Conservation										.																				.
Alig confidence										.																				.														.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		R	I	S	T	V	K	F	G	A	K	V	E	D	C	R	F	I	L	E	Q	A	K	K	L	N	I	D	V	T	G	V	S	F	H	V	G	S	G	S	T	D	A	.	.	.	.	.	.	S	T	F	A	Q	A	I	S	D	S	R	F	V	F	D	M	G	T	E	L	G	F	N	M	H	I	L	D	I	G	G	G
Template Known Secondary structure			B					S		B		G	G	G											T	T												S			S		T	.	.	.	.	.	.																				T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions