Job Description P32689 Confidence 5.14% Date Thu Jan 5 11:50:13 GMT 2012 Rank 69 Aligned Residues 152 % Identity 11% Template d3prna_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.90

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		D	L	K	L	R	L	W	E	E	S	Y	W	L	P	Q	V	A	V	G	A	R	D	I	G	G	T	G	.	.	L	F	D	A	E	Y	L	V	A	S	K	A	W	G	P	F	D	F	T	L	G	L	G	W	G	Y	L	G	T	S	G	N	V	K	N	P	L	C	S	A	S	D	K	Y	C	Y	R	D	N	S	Y
Query Conservation																													.	.
Alig confidence																													.	.
Template Conservation
Template Sequence		N	G	I	A	V	T	Y	S	I	S	G	V	N	L	Y	L	S	Y	V	D	P	D	Q	T	V	D	S	S	L	V	T	E	E	F	G	I	A	A	D	W	S	N	D	M	I	S	L	A	A	A	Y	T	T	D	A	G	G	I	V	D	N	D	I	A	F	V	G	A	A	Y	K	F	N	D	A	G	T	V	G	L
Template Known Secondary structure											S	S										T	T	T	T	S		G	G	G	S													S	S										S	G	G	G		T	T													S	S	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		K	Q	A	G	S	I	D	G	S	Q	M	F	H	G	P	A	S	L	F	G	G	V	E	Y	Q	T	P	W	Q	P	L	R	L	K	L	E	Y	E	G	N	N	Y	Q	Q	D	F	A	G	K	L	E	Q	K	S	K	F	N	V	G	A	I	Y	R	V	T	D	W	A	D	V	N	L	S	Y	E	R	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence														.	.	.	.									.	.																.	.	.	.	.	.	.																														.	.	.
Template Conservation														.	.	.	.									.	.																.	.	.	.	.	.	.
Template Sequence		N	W	Y	D	N	G	L	S	T	A	G	D	.	.	.	.	Q	V	T	L	Y	G	N	Y	.	.	A	F	G	A	T	T	V	R	A	Y	V	S	D	I	D	.	.	.	.	.	.	.	R	A	G	A	D	T	A	Y	G	I	G	A	D	Y	Q	F	A	E	G	V	K	V	S	G	S	V	Q	S	G	F	A	N
Template Known Secondary structure							T	T	S	T	T		S	.	.	.	.									.	.			T	T												.	.	.	.	.	.	.	S	T	T															T	T											T	T
Template Predicted Secondary structure														.	.	.	.									.	.																.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
			263	.	.	.	.	.	.	270	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	T	F	M	F	G	V	T	L	R
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	T	V	A	D	V	G	V	R	F	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions