Job Description P32689 Confidence 21.54% Date Thu Jan 5 11:50:13 GMT 2012 Rank 22 Aligned Residues 137 % Identity 16% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		D	L	K	L	R	L	W	E	E	S	Y	W	L	P	Q	V	A	V	G	A	R	D	I	G	G	T	G	.	.	.	.	L	F	D	A	E	Y	L	V	A	S	K	A	W	G	P	F	D	F	T	L	G	L	G	W	G	Y	L	G	T	S	G	N	V	K	N	P	L	C	S	A	S	D	K	Y	C	Y	R	D	N
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	S	Y	Y	T	P	N	F	G	G	F	N	A	G	F	G	Y	A	F	D	E	K	Q	T	I	G	T	A	D	S	V	G	R	Y	I	G	G	Y	V	A	Y	D	N	G	P	L	S	A	S	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	Q	K
Template Known Secondary structure										B	T	T											T	T			B	T	T	B	S	S	T	T												S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																								190	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	K	Q	A	G	S	I	D	G	S	Q	M	F	H	G	P	A	S	L	F	G	G	V	E	Y	Q	T	P	W	Q	P	L	R	L	K	L	E	Y	E	G	N	N	Y	Q	Q	D	F	A	G	K	L	E	Q	K	S	K	F	N	V	G	A	I	Y	R	V	T	D	W	A	D	V	N	L	S	Y	E	R	G	N
Query Conservation
Alig confidence																.	.	.	.	.	.	.							.	.																												.
Template Conservation																.	.	.	.	.	.	.							.	.																												.
Template Sequence		T	A	V	G	G	L	A	T	D	R	D	E	I	T	.	.	.	.	.	.	.	L	G	A	S	Y	N	.	.	F	G	V	A	K	L	S	G	L	L	Q	Q	T	K	F	K	R	D	I	G	G	D	I	K	T	N	S	.	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D
Template Known Secondary structure					T	T										.	.	.	.	.	.	.							.	.		S	S															T	T	S								.										T	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.							.	.																												.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		264										.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		T	.	.	.	.	.	.	.	.	.	F	M	F	G	V	T	L	R	T	N	F	N	D
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	A	I	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T
Template Known Secondary structure			G	G	G	T														S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions