Job Description P32689 Confidence 85.57% Date Thu Jan 5 11:50:13 GMT 2012 Rank 3 Aligned Residues 131 % Identity 19% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		Y	Y	S	A	S	V	Q	L	F	P	W	L	E	T	T	L	R	Y	T	D	V	R	T	R	Q	Y	S	S	V	E	A	F	S	G	D	Q	T	Y	K	D	K	A	F	D	L	K	L	R	L	W	E	E	S	Y	W	L	P	Q	V	A	V	G	A	R	.	.	D	I	G	G	T	G	L	F	D	A	E	Y	L	V
Query Conservation																																																																		.	.
Alig confidence																											.																																							.	.											.	.	.	.
Template Conservation																											.																																																			.	.	.	.
Template Sequence		G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	F	L	G	R	M	P	.	Y	K	G	S	V	E	N	G	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	N	V	Y	G	.	.	.	.
Template Known Secondary structure										T	T	T												S		T	.	T		S	S				S																	S	S	S	S																		S	B	T	T	B	.	.	.	.
Template Predicted Secondary structure																											.																																																			.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	K	A	W	G	P	F	D	F	T	L	G	L	G	W	G	Y	L	G	T	S	G	N	V	K	N	P	L	C	S	A	S	D	K	Y	C	Y	R	D	N	S	Y	K	Q	A	G	S	I	D	G	S	Q	M	F	H	G	P	A	S	L	F	G	G	V	E	Y	Q	T	P	W	Q	P	L	R	L	K	L	E	Y
Query Conservation
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		.	K	N	H	D	T	G	V	S	P	V	F	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	Y	A	I	T	.	P	E	I	A	T	R	L	E	Y
Template Known Secondary structure		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	T	T
Template Predicted Secondary structure		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
			113	.	.	.	.	.	.	120	.	.	.	.	.	.																																																		.	.	.	130	.	.		.	.	.	.	.	.	.	140	.
					223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	G	N	N	Y	Q	Q	D	F	A	G	K	L	E	Q	K	S	K	F	N	V	G	A	I	Y	R	V	T	D	W
Query Conservation		.	.	.
Alig confidence		.	.	.																		.
Template Conservation																						.
Template Sequence		Q	F	T	N	N	I	G	D	A	H	T	I	G	T	R	P	D	N	G	M	.	L	S	L	G	V	S	Y	R	F	G	Q	G
Template Known Secondary structure										B	T	T	T	T								.											S	S
Template Predicted Secondary structure																						.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions