Job Description P32689 Confidence 5.15% Date Thu Jan 5 11:50:13 GMT 2012 Rank 68 Aligned Residues 61 % Identity 15% Template c3qq2C_ PDB info PDB header:membrane protein/protein transport Chain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka Resolution 3.00 Å

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		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	E	V	L	Y	R	P	L	D	S	N	W	A	F	G	L	D	A	N	Y	V	K	Q	R	D	W	R	S	A	K	D	M	M	K	F	T	D	Y	S	V	K	T	G	H	L	T	A	Y	W	T	P	S	F	A	Q	D	V	L	V	K	A	S	V	G
Query Conservation
Alig confidence																												.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		I	G	L	D	R	G	W	S	A	S	G	G	R	W	Y	A	G	G	L	L	G	Y	T	Y	A	D	.	.	.	.	.	R	T	Y	P	G	D	G	G	G	K	V	K	G	L	H	V	G	G	Y	A	A	Y	V	G	D	G	G	Y	Y	L	D	T	V	L	R
Template Known Secondary structure											T	T																.	.	.	.	.			B	T	T	T	B																		S	S	S	B
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.						.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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