Job Description P32689 Confidence 37.52% Date Thu Jan 5 11:50:13 GMT 2012 Rank 14 Aligned Residues 132 % Identity 14% Template c2x27X_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.
Predicted Secondary structure																																			.	.	.																.	.																.	.	.	.	.	.	.
Query SS confidence																																			.	.	.																.	.																.	.	.	.	.	.	.
Query Sequence		Y	S	A	S	V	Q	L	F	P	W	L	E	T	T	L	R	Y	T	D	V	R	T	R	Q	Y	S	S	V	E	A	F	S	G	.	.	.	D	Q	T	Y	K	D	K	A	F	D	L	K	L	R	L	.	.	W	E	E	S	Y	W	L	P	Q	V	A	V	G	A	R	.	.	.	.	.	.	.	D	I	G	G	T
Query Conservation																																			.	.	.																.	.																.	.	.	.	.	.	.
Alig confidence																																			.	.	.																.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	F	T	Y	M	F	A	D	K	W	G	V	E	L	V	A	A	T	P	F	N	H	Q	V	D	V	K	G	L	L	D	G	K	L	A	D	I	K	Q	L	P	P	T	L	L	L	Q	Y	Y	P	M	G	G	T	N	S	A	F	Q	P	Y	G	G	L	G	V	N	Y	T	T	F	F	D	E	D	L	A	S	N
Template Known Secondary structure								S	S	S	S									S																																T	T	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	F	D	A	E	Y	L	V	A	S	K	A	W	G	P	F	D	F	T	L	G	L	G	W	G	Y	L	G	T	S	G	N	V	K	N	P	L	C	S	A	S	D	K	Y	C	Y	R	D	N	S	Y	K	Q	A	G	S	I	D	G	S	Q	M	F	H	G	P	A	S	L	F	G	G	V	E	Y	Q	T	P	W
Query Conservation
Alig confidence															.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation															.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		R	K	A	Q	G	F	S	S	M	K	L	Q	D	.	.	.	.	.	.	S	W	G	L	A	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	F	D	Y	M	L	N	.
Template Known Secondary structure					T	T									.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	.
Template Predicted Secondary structure															.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.																																														.	.	.	.	.	.	.	160
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240															.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	L	R	L	K	L	E	Y	E	G	N	N	Y	Q	Q	D	F	A	G	K	L	E	Q	K	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	V	G	A	I	Y	R	V
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	H	A	L	F	N	M	A	V	W	Y	M	D	I	D	T	K	A	S	I	N	G	P	S	A	L	G	V	N	K	T	K	V	D	V	D	V	D	P	W	V	Y	M	I	G	F	G	Y	K	F
Template Known Secondary structure		S	S																						T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions