Job Description P32689 Confidence 6.24% Date Thu Jan 5 11:50:13 GMT 2012 Rank 51 Aligned Residues 39 % Identity 10% Template c1uv7A_ PDB info PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	V	A	N	Q	L	T	L	L	K	Y	N	A	G	L	A	D	P	Q	I	Q	A	K	G	D	T	L	Y	V	T	G	E	Q	V	K	Y	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	P	L	N	Q	V	I	T	N	S	T	R	Q	F	N	I	E	L	I	R	V	Q	P	R	G	E	X	X	Q	V	W	I	Q	P	L	P	F	S	Q
Template Known Secondary structure																T										S	S									B
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions