Job Description P0AB85 Confidence 100.00% Date Thu Jan 5 11:14:52 GMT 2012 Rank 2 Aligned Residues 305 % Identity 26% Template d1vrma1 SCOP info T-fold ApbE-like ApbE-like Resolution 1.58

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	T	V	L	E	G	K	T	M	G	T	F	W	R	A	S	I	P	G	I	D	A	K	R	S	A	E	L	K	E	K	I	Q	T	Q	L	D	A	D	D	Q	L	L	S	T	Y	K	K	D	S	A	L	M	R	F	N	D	S	Q	S	L	S	P	W	P	V	S	E	A	M	A	D	I	V	T	T	S	L	R
Query Conservation
Alig confidence																									.																																						.
Template Conservation																									.																																						.
Template Sequence		Q	Y	Y	E	L	R	D	F	A	L	G	T	S	V	R	I	V	V	S	S	Q	K	I	.	N	P	R	T	I	A	E	A	I	L	E	D	X	K	R	I	T	Y	K	F	S	F	T	D	E	R	S	V	V	K	K	I	N	D	H	P	N	.	E	W	V	E	V	D	E	E	T	Y	S	L	I	K	A	A	C	A
Template Known Secondary structure											T	T										S	S	S	.																				T		S	S		T	T								T	S		S	.	S
Template Predicted Secondary structure																									.																																						.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	K	T	D	G	A	M	D	I	T	V	G	P	L	V	N	L	W	G	F	G	P	E	Q	Q	P	V	Q	I	P	S	Q	E	Q	I	D	A	M	K	A	K	T	G	L	Q	H	L	T	V	I	N	Q	S	H	Q	Q	Y	L	Q	K	D	L	P	D	L	Y	V	D	L	S	T	V	G	E	G	Y	A	A
Query Conservation
Alig confidence																																																														.	.	.
Template Conservation																																																														.	.	.
Template Sequence		F	A	E	L	T	D	G	A	F	D	P	T	V	G	R	L	L	E	L	W	G	F	T	G	N	Y	E	N	L	R	V	P	S	R	E	E	I	E	E	A	L	K	H	T	G	Y	K	N	V	L	F	D	D	K	N	X	R	V	X	V	.	.	.	K	N	G	V	K	I	D	L	G	G	I	A	K	G	Y	A	L
Template Known Secondary structure						T	T	T	S	S		T	T	T								T	T	T	S		G	G	G														T	T			G	G	G					T	T	T	T					.	.	.		T	T						T	T	T
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		193	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		D	H	L	A	R	L	.	M	E	Q	E	G	I	S	R	Y	L	V	S	V	G	G	A	L	N	S	R	G	M	N	G	E	G	L	P	W	R	V	A	I	Q	K	P	T	D	K	E	N	A	V	Q	A	V	V	D	I	N	G	H	G	I	S	T	S	G	S	Y	R	N	Y	Y	E	L	D	G	K	R	L	S	H
Query Conservation								.
Alig confidence								.																																									.	.
Template Conservation																																																	.	.
Template Sequence		D	R	A	R	Q	I	A	L	S	F	D	E	N	A	T	G	F	V	E	A	G	G	D	V	R	I	I	G	P	K	F	G	K	Y	P	W	V	I	G	V	K	D	P	R	G	D	D	.	.	V	I	D	Y	I	Y	L	K	S	G	A	V	A	T	S	G	D	Y	E	R	Y	F	V	V	D	G	V	R	Y	H	H
Template Known Secondary structure													T	T								T	T								B	T	T	T	B									T	T	S	S	S	.	.								S	S	S							T	T	S	S					T	T					S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		V	I	D	P	Q	T	G	R	P	I	E	H	N	L	V	S	V	T	V	I	A	P	T	A	L	E	A	D	A	W	D	T	G	L	M	V	L	G	P	E	K	A	K	E	V	V	R	R	E	.	.	.	G	L	A	V	Y	M	I	T	K	E	G	D	S	F	K	T	W	M	S	P	Q	F	K	S	F	L	V	S
Query Conservation																																																			.	.	.
Alig confidence													.																																						.	.	.												.	.	.
Template Conservation													.																																																				.	.	.
Template Sequence		I	L	D	P	S	T	G	Y	P	A	R	.	G	V	W	S	V	T	I	I	A	E	D	A	T	T	A	D	A	L	S	T	A	G	F	V	X	A	G	K	D	W	R	K	V	V	L	D	F	P	N	X	G	A	H	L	L	I	V	L	E	G	G	.	.	.	A	I	E	R	S	E	T	F	K	L	F	E	R	E
Template Known Secondary structure			B		T	T	T	S	S	B			.	S									S	S																										G	G	G	G	T								T	T	S	.	.	.										T	T	S
Template Predicted Secondary structure													.																																																				.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions