 |
Job Description | P27253 | Confidence | 25.42% | Date | Thu Jan 5 11:43:33 GMT 2012 |
Rank | 473 | Aligned Residues | 97 |
% Identity | 13% | Template | d2naca2 |
SCOP info | Flavodoxin-like
| Formate/glycerate dehydrogenase catalytic domain-like
| Formate/glycerate dehydrogenases, substrate-binding domain
|
Resolution | 1.80 |
|
 |
  |   |
604 | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | S | A | Y | S | D | L | G | F | D | V | D | L | S | P | M | F | S | T | P | E | E | I | A | R | L | A | V | E | N | D | V | H | V | V | G | A | S | S | L | A | A | G | H | K | T | L | I | P | E | L | V | E | A | L | K | K | W | G | R | E | D | I | C | V | V | A | G | G | V | I | P | P | Q | D | Y | A | F | L |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|   |
|
|
|
|
|   |   |
|
|   |
|   |
|
|
|   |   |
|
|
|
| . |   |
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|
| . | . | . | . | . |   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
L | R | K | Y | L | E | S | N | G | H | T | L | V | V | T | S | D | K | D | G | P | D | S | V | F | E | R | E | L | . |
V | D | A | D | V | V | I | S | Q | P | F | W | P | A | Y | L | T | . |
. |
. |
. |
. |
P | E | R | I | A | K | A | K | N | L | K | L | A | L | T | A | G | I | G | S | D | H | V | D | L | Q | S | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
|
| S | S | T | T | S |  |  |  |  |  |  | . | T | T |
| S |  |  |  |  | B | T | T | B |
|
|
| B |
| . | . | . | . | . |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  | S | S | S |
|
| T | T | B |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
  |
  |   |
684 | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | R | G | V | A | A | I | Y | G | P | G | T | P | M | L | D | S | V | R | D | V | L |
Query Conservation |   |
  |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|   |
|
|
Template Sequence |   |
I | D | R | N | V | T | V | A | E | V | T | Y | C | N | S | T | T | L | T | A | Q | A | R |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |
| T | T | T | T |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|