Return to main results Retrieve Phyre Job Id

Job DescriptionP27253
Confidence39.60%DateThu Jan 5 11:43:33 GMT 2012
Rank344Aligned Residues84
% Identity18%Templated2hmva1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Potassium channel NAD-binding domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   620.........630.........640.........650.........660.........670.........680.........690.........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  MFSTPEEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAFLQERGVAAIYGPGTPML
Query Conservation   
 
 

 
 
   


 
 





  
 
    
  


 

     




  
      
  


      
    
Alig confidence 
































..

















...























Template Conservation 

      
    
  
  

     
      ..            


   ...       
   
 
 

 
    
Template Sequence  ANATEENELLSLGIRNFEYVIVAIGANIQASTL. . TTLLLKELDIPNIWVKAQ. . . NYYHHKVLEKIGADRIIHPEKDMG
Template Known Secondary structure 

TT
TTTGGG
S


S
..TT
S

...ST
S
Template Predicted Secondary structure 











..





...





Template SS confidence 















































































   55....60.........70.........80....... ..90.........100..... ....110.........120.........
 
   700........
Predicted Secondary structure 
Query SS confidence 








Query Sequence  DSVRDVLNL
Query Conservation           
Alig confidence 








Template Conservation    

  
  
Template Sequence  VKIAQSLSD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 








   130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions