 |
Job Description | P27253 | Confidence | 69.93% | Date | Thu Jan 5 11:43:33 GMT 2012 |
Rank | 190 | Aligned Residues | 106 |
% Identity | 12% | Template | d1p6qa_ |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | UNK |
|
 |
  |   |
601 | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | |
|
. | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | V | I | A | S | A | Y | S | D | L | G | F | D | V | D | L | S | P | M | F | S | T | P | E | E | I | A | R | L | A | V | E | N | D | V | H | V | V | G | A | S | S | L | A | A | G | H | K | T | L | I | P | E | L | V | E | A | L | K | K | . |
. |
W | G | R | E | D | I | C | V | V | A | G | G | V | I | P | P | Q |
Query Conservation |   |
|   |
|   |   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|   | . | . |
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   | . | . |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   |   |   | . | . |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |
Template Sequence |   |
R | L | L | L | G | D | A | L | Q | Q | L | G | F | K | Q | I | T | A | . |
. |
A | G | D | G | E | Q | G | M | K | I | M | A | Q | N | P | H | H | L | V | I | S | D | F | N | M | P | K | M | D | . |
. |
G | L | G | L | L | Q | A | V | R | A | N | P | A | T | K | K | A | A | F | I | I | L | T | A | Q | G | D | R | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T |
| S |
|  |  |
| . | . |
| S | S |  |  |  |  |  |  |  |  |  | T | S |
|
| S |  |  |  |  |
| S | S | S |
| S | S |
| . | . |  |  |  |  |  |  |  |  | T | T |
| T | T | S | T | T |
|  |  |  |  |
|
| S |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
679 | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | |
|
|
. | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Y | A | F | L | Q | E | R | G | V | A | A | I | Y | . |
. |
. |
G | P | G | T | P | M | L | D | S | V | R | D | V | L | N | L | I | S |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|
|   |   |   |   | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
L | V | Q | K | A | A | A | L | G | A | N | N | V | L | A | K | P | F | T | I | E | K | M | K | A | A | I | E | A | V | F | G | A | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
| S |
|  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|