Return to main results Retrieve Phyre Job Id

Job DescriptionP27253
Confidence29.06%DateThu Jan 5 11:43:33 GMT 2012
Rank441Aligned Residues92
% Identity11%Templated1p0ka_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   620.........630.........640........ .650.........660.........670.........680.........690.....
Predicted Secondary structure 












....
















Query SS confidence 




























. . . .














































Query Sequence  MFSTPEEIARLAVENDVHVVGASSLAAGH. . . . KTLIPELVEALKKWGREDICVVAGGVIPPQDYAFLQERGVAAIYGPG
Query Conservation   
 
 

 
 
   


 
 





  
.... 
    
  


 

     




  
      
  


      
Alig confidence 




























....














































Template Conservation          
  
   


 
 
 

        


    
  
      
 

 




 
 

 









 


Template Sequence  GFGMSKASAGKLYEAGAAAVDIGGRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAG
Template Known Secondary structure  SS


T
S


GGGGTT
S


TTSSS

STT
S
Template Predicted Secondary structure 


































Template SS confidence 















































































   187..190.........200.........210.........220.........230.........240.........250.........260......
 
   696...700.........710.
Predicted Secondary structure 
Query SS confidence 















Query Sequence  TPMLDSVRDVLNLISQ
Query Conservation                  
Alig confidence 















Template Conservation    
 

   
  

  
Template Sequence  HFLKALTDSGEEGLLE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















   282.......290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions