Job Description P27253 Confidence 52.65% Date Thu Jan 5 11:43:33 GMT 2012 Rank 268 Aligned Residues 123 % Identity 13% Template c3pfmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf Resolution 2.91 Å

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		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.			.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure																															.	.																																															.	.	.
Query SS confidence																															.	.																																															.	.	.
Query Sequence		D	A	I	V	A	Q	T	E	Q	F	L	A	D	N	G	R	R	P	R	I	L	I	A	K	M	G	Q	D	G	.	.	H	D	R	G	A	K	V	I	A	S	A	Y	S	D	L	G	F	D	V	D	L	S	P	M	F	S	T	P	E	E	I	A	R	L	A	V	E	N	D	V	H	V	V	G	A	S	.	.	.
Query Conservation																															.	.																																															.	.	.
Alig confidence																															.	.																					.																										.	.	.
Template Conservation																																																					.
Template Sequence		P	H	A	L	N	R	V	F	E	I	L	R	Q	H	S	D	L	G	P	R	L	T	L	E	I	G	E	E	Q	L	P	E	Q	A	X	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	.	L	Q	R	F	G	G	R	F	S	X	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y
Template Known Secondary structure															T	G	G	G	T	T	T							S	S	S																		T					.					T	T	T	G	G	G	G	G	G					T		S						G	G	G
Template Predicted Secondary structure																																																					.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
						643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	L	A	A	G	H	K	T	L	I	P	E	L	V	E	A	L	K	K	W	G	R	E	D	I	C	V	V	A	G	G	V	I	P	P	Q	D	Y	A	F	L	Q	E	R	G	V	A	A	I	Y	G	P
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																						.	.	.
Template Conservation																											.	.	.
Template Sequence		I	R	D	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	.	.	.	L	P	L	I	A	E	R	V	E	T	E	G	E	L	Q	V	I	R	E	X	G	L	Y	G	V	Q	G	Q
Template Known Secondary structure		G	T	T	T	T	T		T																T	T	.	.	.										S											T		S				S	G
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.				.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions