Job Description P27253 Confidence 30.05% Date Thu Jan 5 11:43:33 GMT 2012 Rank 431 Aligned Residues 117 % Identity 10% Template c3lopA_ PDB info PDB header:substrate binding protein Chain: A: PDB Molecule:substrate binding periplasmic protein; PDBTitle: crystal structure of substrate-binding periplasmic protein2 (pbp) from ralstonia solanacearum Resolution 1.55 Å

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		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.					.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		K	S	A	S	E	F	D	A	I	V	A	Q	T	E	Q	F	L	A	D	N	G	R	R	P	R	I	L	I	A	K	M	G	Q	D	G	H	D	R	G	A	K	V	I	A	S	A	Y	S	D	L	G	F	D	V	D	L	.	.	.	.	S	P	M	F	S	T	P	E	E	I	A	R	L	A	V	E	N	D	V	H
Query Conservation																																																										.	.	.	.
Alig confidence																									.																																	.	.	.	.
Template Conservation																									.
Template Sequence		P	I	K	A	S	Y	Q	Q	E	I	D	K	X	I	T	A	L	V	T	I	G	V	T	.	R	I	G	V	L	Y	Q	E	D	A	L	G	K	E	A	I	T	G	V	E	R	T	L	K	A	H	A	L	A	I	T	A	X	A	S	Y	P	R	N	T	A	N	V	G	P	A	V	D	K	L	L	A	A	D	V	Q
Template Known Secondary structure				S																	T	T			.								T	T																T	T	T				S							T	T	S													S			S
Template Predicted Secondary structure																									.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	A	S	S	L	A	A	G	H	K	T	L	I	P	E	L	V	E	A	L	K	K	W	G	R	E	D	I	C	V	V	A	G	G	V	I	P	P	Q	D	Y	A	F	L
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		A	I	F	L	G	A	.	.	.	.	T	A	E	P	A	A	Q	F	V	R	Q	Y	R	A	R	G	G	E	A	Q	L	L	G	L	S	S	I	D	P	G	I	L	Q	K	V	A
Template Known Secondary structure							S	.	.	.	.															T	T									T	T	S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		229	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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