 |
Job Description | P27253 | Confidence | 31.32% | Date | Thu Jan 5 11:43:33 GMT 2012 |
Rank | 420 | Aligned Residues | 59 |
% Identity | 20% | Template | c3gndC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:aldolase lsrf; |
PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate
|
Resolution | 2.90 Å |
|
 |
  |   |
624 | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 690 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | E | I | A | R | L | A | V | E | N | D | V | H | V | V | G | A | S | S | L | A | A | G | H | K | T | L | I | P | E | L | V | E | A | L | K | K | W | G | R | E | D | I | C | V | V | A | G | G | V | I | P | P | Q | D | Y | A | F | L | . |
. |
. |
. |
. |
. |
Q | E | R | G | V | A | A | I | Y |
Query Conservation |   |
  |
|
|   |
|   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
| . | . | . | . | . | . |   |   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|
| . |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
Template Sequence |   |
F | S | L | A | T | R | I | A | A | E | M | G | A | Q | I | I | K | T | Y | Y | V | E | K | G | F | E | R | I | V | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | C | P | V | P | I | V | I | A | G | G | . |
K | K | L | P | E | R | E | A | L | E | M | C | W | Q | A | I | D | Q | G | A | S | G | V | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | T |
| S | S |
|  |  |  |  |
|
| . | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 220 | . | . | . | . | . | . | . | |
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|