Job Description P27253 Confidence 81.32% Date Thu Jan 5 11:43:33 GMT 2012 Rank 130 Aligned Residues 103 % Identity 8% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	A	Y	S	D	L	G	F	D	V	D	L	S	P	M	F	S	T	P	E	E	I	A	R	L	A	V	E	N	D	V	H	V	V	G	A	S	S	L	A	A	G	H	K	T	L	I	P	E	L	V	E	A	L	K	K	W	G	R	E	D	I	C	V	V	A	G	G	V	I	P	P	Q	D	Y	A	F	L
Query Conservation
Alig confidence																.	.																													.	.																									.
Template Conservation																.	.																													.	.																									.
Template Sequence		I	R	N	L	L	I	K	N	D	I	E	I	L	A	.	.	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	.	.	V	N	G	I	Q	V	L	E	T	L	R	K	R	Q	Y	S	G	I	I	I	I	V	S	A	.	K	D	H	F	Y	G	K	H	C
Template Known Secondary structure									T	T						.	.			S	S	S	T	T											S						T	T		S	S	.	.	S												T	T			S								.				S	T
Template Predicted Secondary structure																.	.																													.	.																									.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	R	G	V	A	A	I	Y	G	P	G	T	P	M	L	D	S	V	R	D	V	L	N	L	I	S	Q	H
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		A	D	A	G	A	N	G	F	V	S	K	K	E	G	.	M	N	N	I	I	A	A	I	E	A	A	K	N	G
Template Known Secondary structure				T	T		S					G	G	G		.	T												T	T
Template Predicted Secondary structure																.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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