Job Description P27253 Confidence 98.84% Date Thu Jan 5 11:43:33 GMT 2012 Rank 18 Aligned Residues 198 % Identity 15% Template c3ezxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein Resolution 2.56 Å

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		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.					.	.	.	.	.	.	.	.	520	.	.	.	.	.						.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.															.	.	.	.	.
Query SS confidence																																			.	.	.	.															.	.	.	.	.
Query Sequence		N	E	Q	I	A	S	L	E	R	I	R	A	T	R	D	D	A	A	V	T	A	A	L	N	A	L	T	H	A	A	Q	H	N	.	.	.	.	E	N	L	L	A	A	A	V	N	A	A	R	V	R	.	.	.	.	.	A	T	L	G	E	I	S	D	A	L	E	V	A	F	D	R	Y	L	V	P	S	Q	C	V
Query Conservation																																			.	.	.	.															.	.	.	.	.
Alig confidence																																			.	.	.	.															.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	I	F	D	K	L	R	D	A	I	V	N	Q	N	V	A	G	T	P	E	L	C	K	E	A	L	A	A	G	V	P	A	L	D	I	I	T	K	G	L	S	V	G	M	K	I	V	G	D	K	F	E	A	A	E	I	F	L	P	Q	I	M	M	S	G	K	A	M	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T		T	T												T	T										T														T	T	S	S													.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	V	I	A	Q	S	Y	H	Q	S	E	K	S	A	S	E	F	D	A	I	V	A	Q	T	E	Q	F	L	A	D	N	G	R	R	P	R	I	L	I	A	K	M	G	Q	D	G	H	D	R	G	A	K	V	I	A	S	A	Y	S	D	L	G	F	D	V	D	L	S	P	M	F	S	T	P	E	E	I	A	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	A	M	E	V	L	T	P	E	L	E	K	N	K	K	E	A	G	L	A	I	T	F	V	A	E	G	D	I	H	D	I	G	H	R	L	V	T	T	M	L	G	A	N	G	F	Q	I	V	D	L	G	V	D	V	L	N	E	N	V	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	S	S													T	T																	T	S								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		630	.	.	.	.	.	.	.	.	.	640	.			.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.		.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
Predicted Secondary structure														.	.																							.
Query SS confidence														.	.																							.
Query Sequence		L	A	V	E	N	D	V	H	V	V	G	A	.	.	S	S	L	A	A	G	H	K	T	L	I	P	E	L	V	E	A	L	K	K	W	G	.	R	E	D	I	C	V	V	A	G	G	V	I	P	P	Q	D	Y	A	F	L	Q	E	R	G	V	A	A	I	Y	G	P	G	T	P	M	L	D	S	V	R	D	V	L
Query Conservation														.	.																							.
Alig confidence														.	.																							.											.	.
Template Conservation																																																	.	.
Template Sequence		E	A	A	K	H	K	G	E	K	V	L	L	V	G	S	A	L	M	T	T	S	M	L	G	Q	K	D	L	M	D	R	L	N	E	E	K	L	R	D	S	V	K	C	M	F	G	G	.	.	A	P	V	S	D	K	W	I	E	E	I	G	A	D	A	T	A	E	N	A	A	E	A	A	K	V	A	L	E	V	M
Template Known Secondary structure						T	T	T	S									S	S					T												T	T		G	G	G	S						S	.	.	S	S										T			B			S	S											T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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