Return to main results Retrieve Phyre Job Id

Job DescriptionP27253
Confidence53.12%DateThu Jan 5 11:43:33 GMT 2012
Rank262Aligned Residues94
% Identity20%Templatec3btuD_
PDB info PDB header:transcriptionChain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k]
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   613......620.........630.........640.........650.........660.........670....... ..680....
Predicted Secondary structure 



























........
Query SS confidence 
































































. . . . . . . .






Query Sequence  FDVDLSPMFSTPEEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPP. . . . . . . . QDYAFLQ
Query Conservation 


     
 
 

 
 
   


 
 





  
 
    
  


 

     




  
 ........     
 
Alig confidence 
















...
































.






..

........






Template Conservation          
    


 ...   

 
 
 

   
      

 

      .



 

..


 
  

  
   
 
Template Sequence  LKLSNATAFPTLESFAS. . . SSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNL. KYLFVEW. . ALACSLDQAESIYKAAA
Template Known Secondary structure  TT
TT

SS...
SS
S
S
GGGGGG
TT
.

S..S

SS
Template Predicted Secondary structure 







...
















.


..




Template SS confidence 















































































   67..70.........80... ......90.........100.........110...... ...120... ......130.........140
 
   685....690.........700.........710..
Predicted Secondary structure 







Query SS confidence 



























Query Sequence  ERGVAAIYGPGTPMLDSVRDVLNLISQH
Query Conservation   


      
                 
Alig confidence 



























Template Conservation    
    
    
  
     
 

  
Template Sequence  ERGVQTIISLQGRKSPYILRAKELISQG
Template Known Secondary structure  T


GGGG
TT
Template Predicted Secondary structure 










Template SS confidence 



























   141........150.........160........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions