Job Description P27253 Confidence 48.50% Date Thu Jan 5 11:43:33 GMT 2012 Rank 297 Aligned Residues 75 % Identity 17% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.													650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.			.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		N	D	V	H	V	V	G	A	S	S	L	A	A	G	H	K	.	.	.	.	.	.	.	.	.	.	.	.	T	L	I	P	E	L	V	E	A	L	K	K	W	G	R	E	D	I	C	V	V	A	G	G	V	I	P	P	Q	D	Y	A	F	L	Q	E	R	G	V	.	.	A	A	I	Y	G	P	G	T	P	M	L
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.										.
Template Conservation																																																																																.
Template Sequence		A	N	S	K	L	V	I	I	T	A	G	A	R	M	V	S	G	Q	T	R	L	D	L	L	Q	R	N	V	A	I	M	K	A	I	V	P	G	V	I	Q	N	S	P	D	C	K	I	I	V	V	T	N	P	V	D	I	L	T	Y	V	V	W	K	I	S	G	F	P	V	G	R	V	I	G	S	G	C	N	.	L
Template Known Secondary structure		T	T									S					T	T	T		S	S		T	T											T	T	T					S	T	T							S	S	S														S		T	T	T					T	T		.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.
		700	.			.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		D	S	.	.	V	R	D	V	L	N	L	I
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		D	S	A	R	F	R	Y	L	I	G	E	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions