Return to main results Retrieve Phyre Job Id

Job DescriptionP27253
Confidence86.28%DateThu Jan 5 11:43:33 GMT 2012
Rank86Aligned Residues105
% Identity10%Templatec2jrlA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   604.....610.........620.........630.........640.........650.........660.........670.........680...
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  IASAYSDLGFDVDLSPMFSTPEEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAFL
Query Conservation     

  




     
 
 

 
 
   


 
 





  
 
    
  


 

     




  
      
Alig confidence 













...


























..

































Template Conservation 
   
   
  
  ...     


  
     
 

 
  

 ..  
      
        

 

           
Template Sequence  LSAILEEEGYHPDT. . . AKTLREAEKKIKELFFPVIVLDVWMPD. . GDGVNFIDFIKENSPDSVVIVITGHGSVDTAVKA
Template Known Secondary structure  TT
B

...S
TTS

SS

SS..S
STTT
SS
SS

Template Predicted Secondary structure 


...















..

















Template SS confidence 















































































   17..20.........30 .........40.........50....... ..60.........70.........80.........90.
 
   684.....690.........700.........710...
Predicted Secondary structure 








Query SS confidence 





























Query Sequence  QERGVAAIYGPGTPMLDSVRDVLNLISQHH
Query Conservation    


      
                  
Alig confidence 





























Template Conservation     

  

 

     
   
   
   
Template Sequence  IKKGAYEFLEKPFSVERFLLTIKHAFEEYS
Template Known Secondary structure  TS



Template Predicted Secondary structure 








Template SS confidence 





























   92.......100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions