Job Description P27253 Confidence 40.94% Date Thu Jan 5 11:43:33 GMT 2012 Rank 337 Aligned Residues 104 % Identity 13% Template c2j48A_ PDB info PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein. Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.			.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		A	K	V	I	A	S	A	Y	S	D	L	G	F	D	V	D	L	S	P	M	F	S	T	P	E	E	I	A	R	L	A	V	E	N	D	V	H	V	V	G	A	S	S	L	A	A	G	H	K	T	L	I	P	E	L	V	E	A	L	K	K	W	.	.	G	R	E	D	I	C	V	V	A	G	G	V	I	P	P	Q
Query Conservation																																																																.	.
Alig confidence																			.	.	.																												.	.														.	.												.	.	.
Template Conservation																			.	.	.																												.	.																											.	.	.
Template Sequence		A	T	V	V	C	E	M	L	T	A	A	G	F	K	V	I	W	.	.	.	L	V	D	G	S	T	A	L	D	Q	L	D	L	L	Q	P	I	V	I	L	M	A	W	P	P	P	D	.	.	Q	S	C	L	L	L	L	Q	H	L	R	E	H	Q	A	D	P	H	P	P	L	V	L	F	L	G	.	.	.	E	P
Template Known Secondary structure												T	T						.	.	.		S															S							S	T	T		.	.		T											T				S	S								S	.	.	.	S
Template Predicted Secondary structure																			.	.	.																												.	.																											.	.	.
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.				.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.			.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.				710	.
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	A	F	L	Q	E	R	G	V	A	A	I	Y	G	P	G	T	P	M	L	D	S	V	R	D	V	L	N	L	I	S	Q	H	H
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		P	V	D	P	L	L	T	A	Q	A	S	A	I	L	S	K	P	L	D	.	P	Q	L	L	L	T	T	L	Q	G	L	C	P	P	N
Template Known Secondary structure			S	S								S				S	S		S	T	.	T									T	T
Template Predicted Secondary structure																					.
Template SS confidence
		712	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.	.	.	.	.	.	.	740	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions