Return to main results Retrieve Phyre Job Id

Job DescriptionP27253
Confidence31.46%DateThu Jan 5 11:43:33 GMT 2012
Rank413Aligned Residues83
% Identity14%Templatec2iyeC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:copper-transporting atpase; PDBTitle: structure of catalytic cpx-atpase domain copb-b
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   612.......620.........630.........640...... ...650.........660.........670...
Predicted Secondary structure 

















..................







Query SS confidence 


































. . . . . . . . . . . . . . . . . .


























Query Sequence  GFDVDLSPMFSTPEEIARLAVENDVHVVGASSLAA. . . . . . . . . . . . . . . . . . GHKTLIPELVEALKKWGREDICVVAGG
Query Conservation 



     
 
 

 
 
   


 
 





 .................. 
 
    
  


 

     




Alig confidence 


































..................


















..





Template Conservation 
 
   
         
  
   

   
 


    
   
   
         
  
   
  
   
  ..
  


Template Sequence  ASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSPEDKVRIIEKLKQNGNK. . VLMIGD
Template Known Secondary structure 
S

GGG

SS
T
S

S

TT

..
Template Predicted Secondary structure 


























..
Template SS confidence 















































































   511........520.........530.........540.........550.........560.........570.........580.. ......
 
   674.....680.........690........
Predicted Secondary structure 










Query SS confidence 
























Query Sequence  VIPPQDYAFLQERGVAAIYGPGTPM
Query Conservation    
      
  


      
   
Alig confidence  ..






















Template Conservation  ..
 

  

  
 




      
Template Sequence  . . GVNDAAALALADVSVAMGNGVDI
Template Known Secondary structure  ..STTTSSSTTT
S
Template Predicted Secondary structure  ..








Template SS confidence 
























   589590.........600.........610.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions