Job Description P27253 Confidence 36.32% Date Thu Jan 5 11:43:33 GMT 2012 Rank 377 Aligned Residues 98 % Identity 15% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.			.	.	.	.	.	.																			.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Predicted Secondary structure																																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	D	V	D	L	S	P	M	F	S	T	P	E	E	I	A	R	L	A	V	E	N	D	V	H	V	V	G	A	S	.	.	S	L	A	A	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	L	I	P	E	L	V	E	A	L	K	K	W	G	R	E	D	I	C	V	V	A
Query Conservation																																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M
Template Known Secondary structure						T	T	S	S															T	T		S									S			T	T	S														T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
											672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	G	V	I	P	P	Q	D	Y	A	F	L	Q	E	R	G	V	A	A	I	Y	G	P	G	T	P	M	L	D	S	V	R	D	V	L	N	L	I	S	Q	H	H
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.		.	.	.																							.
Template Conservation												.	.	.																							.
Template Sequence		T	Y	Y	N	P	I	F	R	I	G	.	.	.	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	P	.	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V
Template Known Secondary structure												.	.	.											T	T							T	T			.														T	T
Template Predicted Secondary structure												.	.	.																							.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions