 |
Job Description | P27253 | Confidence | 79.73% | Date | Thu Jan 5 11:43:33 GMT 2012 |
Rank | 141 | Aligned Residues | 76 |
% Identity | 16% | Template | c2duwA_ |
PDB info |
PDB header:ligand binding protein | Chain: A: PDB Molecule:putative coa-binding protein; |
PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
|
Resolution | UNK |
|
 |
  |   |
614 | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | D | L | S | P | M | F | S | T | P | E | E | I | A | R | L | A | V | E | N | D | V | H | V | V | G | A | S | S | L | A | A | G | H | K | T | L | I | P | E | L | V | E | A | L | K | K | W | G | R | E | D | I | C | V | V | A | G | G | V | I | P | P | Q | D | Y | A | F | L | Q | E | R | G | V | A | A | I | Y | G |
Query Conservation |   |
|
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|   |
|
|   |
| . | . | . | . | . |
|
|   |   |
|
|
|
|
|
|   |
|
| . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   | . |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
| . |   |
|
|
|
Template Sequence |   |
T | L | L | G | Q | Q | G | Y | A | T | L | A | D | . |
. |
. |
. |
. |
V | P | E | K | V | D | M | V | D | V | F | R | N | . |
. |
. |
. |
S | E | A | A | W | G | V | A | Q | E | A | I | A | I | G | A | K | T | . |
L | W | L | Q | L | G | V | I | N | E | Q | A | A | V | L | A | R | E | A | G | L | . |
S | V | V | M |
Template Known Secondary structure |   |
 |  | T | T |  |  |
|
| S | S | T | T | T | . | . | . | . | . |
| S | S |
|
| S |  |  |  |
|
| S |
| . | . | . | . | S | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  | . |  |  |
|
| T | T |
|
|
|  |  |  |  |  |  |  |  | T | T | T |
| . |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |
|
|
|  |  |  | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . |
  |
  |   |
694 | . | . | . | . | . | 700 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
P | G | T | P | M | L | D |
Query Conservation |   |
  |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
Template Sequence |   |
D | R | C | P | A | I | E |
Template Known Secondary structure |   |
S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
123 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|