Job Description P27253 Confidence 45.27% Date Thu Jan 5 11:43:33 GMT 2012 Rank 309 Aligned Residues 125 % Identity 18% Template c2aw5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadp-dependent malic enzyme; PDBTitle: crystal structure of a human malic enzyme Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		123	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure													.																	.																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																	.																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	V	G	K	A	G	V	A	I	D	.	T	V	E	D	M	K	V	L	F	D	Q	I	P	L	D	K	.	M	S	V	S	M	T	M	N	G	A	V	L	P	V	L	A	F	Y	I	V	A	A	E	E	Q	G	V	T	P	D	K	L	T	G	T	I	Q	N	D	I	L	.	.	.	.	.	.	.	.	.	.
Query Conservation													.																	.																																										.	.	.	.	.	.	.	.	.	.
Alig confidence													.																	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	L	G	C	N	G	M	G	I	P	V	G	K	L	A	L	Y	T	A	C	G	G	M	N	P	Q	E	C	L	P	V	I	L	D	V	G	T	E	N	E	E	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	Y	I	G	L	R	Q	R	R	V	R
Template Known Secondary structure		B			G	G	G	G	G																		G	G	G																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			S		S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																							.	.	.	.	.	210	.	.	.	.	.	.	.
										191	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																								.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	E	Y	L	C	R	N	T	Y	I	Y	P	P	.	.	.	.	.	.	.	K	P	S	M	R	I	I	A	D	I	I	A	W	C	S	G	N	M	P	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	I	S	I	S	G	Y
Query Conservation		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	E	Y	D	D	F	L	D	E	F	M	E	A	V	S	S	K	Y	G	M	N	C	L	I	Q	F	E	D	F	A	N	V	N	A	F	R	L	L	N	K	Y	R	N	Q	Y	C	T	F	N	D	D	I	Q	G	T	A	S	V	A	V	A	G	L	L	A	A	L	R	I	T	K	N	K	L	S	D	Q	T	I
Template Known Secondary structure																						T	T							S														T	T	T	S	S				T	T	T																			T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	G	E	A	G	A	N	C	V	Q	Q	V	A	F	T	L	A	D	G	I	E	Y	I	K	A	A	I	S	A	G	L	K	I	D	D	F	A	P	R	L	S	F	F
Query Conservation
Alig confidence									.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		L	F	Q	G	A	G	E	.	.	.	.	.	.	.	A	A	L	G	I	A	H	L	I	V	M	A	L	E	K	E	G	L	P	K	E	K	A	I	K	K	I	W	L	V
Template Known Secondary structure					B		S		.	.	.	.	.	.	.																	T								T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.								.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions