Return to main results Retrieve Phyre Job Id

Job DescriptionP27253
Confidence64.96%DateThu Jan 5 11:43:33 GMT 2012
Rank212Aligned Residues67
% Identity24%Templatec1u4sA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: plasmodium falciparum lactate dehydrogenase complexed with 2,6-2 naphthalenedisulphonic acid
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   634.....640........ .650.........660.........670........ .680........ .690.........700.
Predicted Secondary structure 








........









..


..




Query SS confidence 














. . . . . . . .





























. .









. .












Query Sequence  NDVHVVGASSLAAGH. . . . . . . . KTLIPELVEALKKWGREDICVVAGGVIPPQ. . DYAFLQERGV. . AAIYGPGTPMLDS
Query Conservation 


 
 





  
........ 
    
  


 

     




  
  ..    
  


..      
      
Alig confidence 














........
























..


..









..








.


Template Conservation    








    
 
    
  
   
   
    
 
 


 

..
 
  
      

    



 

 .

 
Template Sequence  AGADVVIVTAGFTKNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN. . PVDVMVQLLHQHSGVPKNKIIGLGGV. LDT
Template Known Secondary structure  TT
S

S



GGGG
TT

SS..S


GGG
.
Template Predicted Secondary structure 














..






.
Template SS confidence 















































































   8990.........100.........110.........120.........130...... ...140.........150.........160.. ...
 
   702.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  VR
Query Conservation    
Alig confidence 

Template Conservation   
Template Sequence  SR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   170.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions