Job Description P27253 Confidence 40.84% Date Thu Jan 5 11:43:33 GMT 2012 Rank 339 Aligned Residues 146 % Identity 15% Template c1qr6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malic enzyme 2; PDBTitle: human mitochondrial nad(p)-dependent malic enzyme Resolution 2.10 Å

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		123	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																							.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure												.																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence												.																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		G	D	V	G	K	A	G	V	A	I	.	D	T	V	E	D	M	K	V	L	F	D	Q	I	P	L	D	K	.	M	S	V	S	M	T	M	N	G	A	V	L	P	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	Y	I	V	A	A	E	E	Q	.	.	.	.
Query Conservation												.																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence												.																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		G	D	L	G	V	Y	G	X	G	I	P	V	G	K	L	C	L	Y	T	A	C	A	G	I	R	P	D	R	C	L	P	V	C	I	D	V	G	T	D	N	I	A	L	L	K	D	P	F	Y	X	G	L	Y	Q	K	R	D	R	T	Q	Q	Y	D	D	L	I	D	E	F	X	K	A	I	T	D	R	Y	G	R	N
Template Known Secondary structure		B			G	G	G	G	G																		G	G	G								S											T	T			S		S	S					S																				T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
			175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	V	T	P	D	K	L	T	G	T	I	Q	N	D	I	L	K	E	Y	L	C	R	N	T	Y	I	Y	P	P	K	P	S	M	R	I	I	A	D	I	I	A	W	C	S	G	N	M	P	R	F	N	T	I	S	I	S	G	Y	H	M	G	E	A	G	A	N	C	V	Q	Q	V	A	F	T	L	A	D	G	I
Query Conservation		.
Alig confidence		.																							.																																										.	.	.	.	.	.	.
Template Conservation																									.																																										.	.	.	.	.	.	.
Template Sequence		T	L	I	Q	F	E	D	F	G	N	H	N	A	F	R	F	L	R	K	Y	R	E	K	.	Y	C	T	F	N	D	D	I	Q	G	T	A	A	V	A	L	A	G	L	L	A	A	Q	K	V	I	S	K	P	I	S	E	H	K	I	L	F	L	G	A	G	.	.	.	.	.	.	.	E	A	A	L	G	I	A	N
Template Known Secondary structure								S														T	T	T	.	S	S				T	T	T															T	T	T			S		G	G	G									S	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																																										.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.								.	.	.	.	.	.	320	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	I	K	A	A	I	S	A	G	L	K	I	D	D	F	A	P	R	L	S	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	V	X	S	X	V	E	N	G	L	S	E	Q	E	A	Q	K	K	I	W	X	F
Template Known Secondary structure									T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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