Job Description P27253 Confidence 62.77% Date Thu Jan 5 11:43:33 GMT 2012 Rank 220 Aligned Residues 67 % Identity 27% Template c1pzfD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:lactate dehydrogenase; PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate Resolution 2.20 Å

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		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.																		.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.			.	.	.	.	.			.	690	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.						.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.						.	.
Query Sequence		N	D	V	H	V	V	G	A	S	S	L	A	A	G	H	K	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	E	L	V	E	A	L	K	K	W	G	R	E	D	I	C	V	V	A	G	G	V	I	P	P	Q	D	Y	A	F	L	.	.	Q	E	R	G	V	.	.	A	A	I	Y
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.						.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.									.	.						.	.
Template Conservation																																																											.	.
Template Sequence		T	G	A	D	C	V	I	V	T	A	G	L	T	K	V	P	G	K	P	D	S	E	W	S	R	N	D	L	L	P	F	N	S	K	I	I	R	E	I	G	Q	N	I	K	K	Y	C	P	K	T	F	I	I	V	V	T	N	.	.	P	L	D	C	M	V	K	V	M	C	E	A	S	G	V	P	T	N	M	I	C
Template Known Secondary structure		T	T		S							S		S	S		T	T			G	G	G			S	G	G	G																				T	T	S							S	.	.	S																T	T	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		693	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	G	T	P	M	L	D	S	V	R
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		G	M	A	C	M	.	L	D	S	G	R
Template Known Secondary structure							.
Template Predicted Secondary structure							.
Template SS confidence
		162	.	.	.	.		.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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