Job Description P27253 Confidence 41.04% Date Thu Jan 5 11:43:33 GMT 2012 Rank 336 Aligned Residues 146 % Identity 15% Template c1o0sB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent malic enzyme; PDBTitle: crystal structure of ascaris suum malic enzyme complexed with nadh Resolution 2.00 Å

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		123	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																							.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure													.																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence													.																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		G	D	V	G	K	A	G	V	A	I	D	.	T	V	E	D	M	K	V	L	F	D	Q	I	P	L	D	K	.	M	S	V	S	M	T	M	N	G	A	V	L	P	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	Y	I	V	A	A	E	E	Q	G	.	.	.
Query Conservation													.																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence													.																	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		G	D	L	G	A	Y	G	I	G	I	P	V	G	K	L	A	L	Y	V	A	L	G	G	V	Q	P	K	W	C	L	P	V	L	L	D	V	G	T	N	N	M	D	L	L	N	D	P	F	Y	I	G	L	R	H	K	R	V	R	G	K	D	Y	D	T	L	L	D	N	F	M	K	A	C	T	K	K	Y	G	Q	K
Template Known Secondary structure		B			G	G	G	G	G																		G	G	G								S											T	T			S		S	S					S																				T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
				176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	T	P	D	K	L	T	G	T	I	Q	N	D	I	L	K	E	Y	L	C	R	N	T	Y	I	Y	P	P	K	P	S	M	R	I	I	A	D	I	I	A	W	C	S	G	N	M	P	R	F	N	T	I	S	I	S	G	Y	H	M	G	E	A	G	A	N	C	V	Q	Q	V	A	F	T	L	A	D	G	I
Query Conservation		.	.
Alig confidence		.	.																						.																																										.	.	.	.	.	.	.
Template Conservation																									.																																										.	.	.	.	.	.	.
Template Sequence		T	L	I	Q	F	E	D	F	A	N	P	N	A	F	R	L	L	D	K	Y	Q	D	K	.	Y	T	M	F	N	D	D	I	Q	G	T	A	S	V	I	V	A	G	L	L	T	C	T	R	V	T	K	K	L	V	S	Q	E	K	Y	L	F	F	G	A	G	.	.	.	.	.	.	.	A	A	S	T	G	I	A	E
Template Known Secondary structure								S														T	T	T	.	S	S																									T			G	G	G									S	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																																										.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	I	K	A	A	I	S	A	G	L	K	I	D	D	F	A	P	R	L	S	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	I	V	H	Q	M	Q	N	E	G	I	S	K	E	E	A	C	N	R	I	Y	L	M
Template Known Secondary structure									T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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