Job Description P09372 Confidence 4.42% Date Thu Jan 5 11:02:14 GMT 2012 Rank 80 Aligned Residues 59 % Identity 10% Template c3cw18_ PDB info PDB header:splicing Chain: 8: PDB Molecule:u1 small nuclear ribonucleoprotein 70 kda; PDB Fragment:nucleotides 57-82 absent, replaced with kissing loop; PDBTitle: crystal structure of human spliceosomal u1 snrnp Resolution 5.49 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	M	L	D	V	V	R	K	F	G	V	E	V	I	A	E	T	N	V	P	L	D	P	N	V	H	Q	A	I	A	M	V	E	S	D	D	V	A	P	G	N	V	L	G	I	M	Q	K	G	Y	T	L	N	G	R	T	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	L	R	R	E	F	E	V	Y	G	P	I	K	R	I	H	M	V	Y	S	K	R	S	G	K	P	R	G	Y	A	F	I	E	Y	E	H	E	R	D	M	H	S	A	Y	K	H	A	D	G	K	K	I	D	G	R	R	V	L
Template Known Secondary structure										T	T	S											S	S	S		S										S	S												T	T			S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions