Job Description P09372 Confidence 4.38% Date Thu Jan 5 11:02:14 GMT 2012 Rank 81 Aligned Residues 60 % Identity 13% Template c3b4mD_ PDB info PDB header:rna binding protein Chain: D: PDB Molecule:polyadenylate-binding protein 2; PDBTitle: crystal structure of human pabpn1 rrm Resolution 2.82 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	S	M	L	D	V	V	R	K	F	G	V	E	V	I	A	E	T	N	V	P	L	D	P	N	V	H	Q	A	I	A	M	V	E	S	D	D	V	A	P	G	N	V	L	G	I	M	Q	K	G	Y	T	L	N	G	R	T	I	R
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		T	A	E	E	L	E	A	H	F	H	G	C	G	S	V	N	R	V	T	I	L	C	D	K	F	S	G	H	P	K	G	F	A	Y	I	E	F	S	D	K	E	S	V	R	T	S	L	A	.	L	D	E	S	L	F	R	G	R	Q	I	K
Template Known Secondary structure											G	G	G											S		S	S	S	S										S	S	S							G	G	.	G	T	T				T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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