Job Description P09372 Confidence 3.91% Date Thu Jan 5 11:02:14 GMT 2012 Rank 96 Aligned Residues 62 % Identity 19% Template c2dnmA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:srp46 splicing factor; PDBTitle: solution structure of rna binding domain in srp46 splicing2 factor Resolution UNK

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	K	S	M	L	D	V	V	R	K	F	G	V	E	V	I	A	E	T	N	V	P	L	D	P	N	V	H	Q	A	I	A	M	V	E	S	D	D	V	A	P	G	N	V	L	G	I	M	Q	K	G	Y	T	L	N	G	R	T	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	P	D	S	L	R	R	V	F	E	K	Y	G	R	V	G	D	V	Y	I	P	R	E	P	H	T	K	A	P	R	G	F	A	F	V	R	F	H	D	R	R	D	A	Q	D	A	E	A	A	M	D	G	A	E	L	D	G	R	E	L	R
Template Known Secondary structure												T	T	T	S									B		S	S	S		S	B		S							S	S	S	S										S	S			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions