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Job DescriptionP0A9C5
Confidence17.24%DateThu Jan 5 11:09:53 GMT 2012
Rank25Aligned Residues78
% Identity13%Templatec3htnA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:putative dna binding protein; PDBTitle: crystal structure of a putative dna binding protein (bt_1116) from2 bacteroides thetaiotaomicron vpi-5482 at 1.50 a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220.........230.........240.........250.........260....
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Query Sequence  PVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGD
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Template Sequence  SINNHTEIVKALNAFCKEKGILSGSING. IGAIGELTLRFFNPK. . . . . . . . . . . . . . . . . . . . TKAYDDKTFREQXEIS
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TT....................T


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   57..60.........70.........80.... .....90......... 100.........110.....
 
   265... .270.........280...
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Query Sequence  NGSG. . . . . . . . . . MHCHMSLSKNGVNLF
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Template Sequence  NLTGNISSXNEQVYLHLHITVGRSDYSAL
Template Known Secondary structure  TT
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   116...120.........130.........140....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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