Job Description P0A9C5 Confidence 100.00% Date Thu Jan 5 11:09:53 GMT 2012 Rank 9 Aligned Residues 331 % Identity 22% Template c3fkyD_ PDB info PDB header:ligase Chain: D: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of the glutamine synthetase gln1deltan182 from the yeast saccharomyces cerevisiae Resolution 2.95 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		H	E	V	K	F	V	D	L	R	F	T	D	T	K	G	K	E	Q	H	V	T	I	P	A	H	Q	V	N	A	E	F	F	E	E	G	K	.	M	F	D	G	S	S	I	G	G	W	K	G	I	N	E	S	D	M	V	L	M	P	D	A	S	T	A	V	I	D	P	F	F	A	D	S	T	L	I	I	R	C	D
Query Conservation																																						.
Alig confidence																																						.											.	.	.											.	.
Template Conservation																																																	.	.	.											.	.
Template Sequence		R	G	R	I	I	A	E	Y	V	W	I	D	G	T	G	N	L	R	S	K	G	R	T	L	K	K	R	I	T	S	I	D	Q	L	P	E	W	N	F	D	G	S	S	T	N	Q	A	.	.	.	P	G	H	D	I	Y	L	K	P	V	.	.	A	Y	Y	P	D	P	F	R	R	G	D	N	I	V	V	L	A	A
Template Known Secondary structure														S	S	S										S	S				S	G	G	G	S							G	G	G	T	T	S	S	.	.	.											.	.						T	T	T		T	T
Template Predicted Secondary structure																																																	.	.	.											.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E	P	G	T	L	Q	G	Y	D	R	D	P	R	S	I	A	K	R	A	E	D	Y	L	R	S	T	G	I	A	D	T	V	L	F	G	P	E	P	E	F	F	L	F	D	D	I	R	F	G	S	S	I	S	G	S	H	V	A	I	D	D	I	E	G	A	W	N	S	S	T	Q	Y	E	G	G	N	K	G
Query Conservation
Alig confidence								.																				.	.			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																				.	.			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Y	N	N	D	G	.	T	P	N	K	F	N	H	R	H	E	A	A	K	L	F	A	A	H	K	.	.	D	E	.	.	E	I	W	F	G	L	E	Q	E	Y	T	L	F	D	M	Y	D	D	V	Y	G	W	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Y
Template Known Secondary structure					T	T	S	.	S	B		T	T													T	G	.	.	G	G	.	.															T	T	S	S	B	T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure								.																				.	.			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																						.	150	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	P	A	V	K	G	G	Y	F	P	V	P	P	V	D	S	A	Q	D	I	R	S	E	M	C	L	V	M	E	Q	M	G	L	V	V	E	A	H	H	H	E	V	A	T	A	G	Q	N	E	V	A	T	R	F	N	T	M	T	K	K	A	D	E	I	Q	I	Y	K	Y	V	V	H	N	V	A	H	R	F	G
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		P	A	P	Q	G	P	Y	Y	C	G	V	G	A	G	K	V	Y	A	R	D	M	I	E	A	H	Y	R	A	C	L	Y	A	G	L	E	I	S	G	I	N	A	E	V	M	.	P	S	Q	W	E	F	Q	V	G	P	C	T	G	I	D	M	G	D	Q	L	W	M	A	R	Y	F	L	H	R	V	A	E	E	F	G
Template Known Secondary structure			S		S	S	S		T	T			S	T	T	T		S																T										S	S	.	T	T											T																				T	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		252	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		K	T	A	T	F	M	P	K	P	M	F	G	D	.	N	G	S	G	M	H	C	H	M	S	L	S	K	N	G	V	N	L	F	A	G	D	K	Y	A	G	L	S	E	Q	A	L	Y	Y	I	G	G	V	I	K	H	A	K	A	I	N	A	L	A	N	P	T	T	N	S	Y	K	R	L	V	P	G	Y	E	A	P
Query Conservation															.
Alig confidence															.																		.	.	.	.	.	.	.																								.	.													.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.																								.	.													.	.	.	.	.
Template Sequence		I	K	I	S	F	H	P	K	P	L	K	G	D	W	N	G	A	G	C	H	A	N	V	S	T	K	E	M	R	Q	P	.	.	.	.	.	.	.	G	G	T	K	Y	I	E	Q	A	I	E	K	L	S	K	R	H	A	E	H	I	K	L	.	.	Y	G	S	D	N	D	M	R	S	M	T	A	.	.	.	.	.
Template Known Secondary structure								S		S	S	S	S	S	S				B												S	S	.	.	.	.	.	.	.	S	T														T							S	.	.	S		T	T	G	G	G				S		.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																								.	.													.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.								.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		V	M	L	A	Y	S	A	R	N	R	S	A	S	I	R	I	P	.	V	V	S	S	P	K	A	R	R	I	E	V	R	F	P	D	P	A	A	N	P	Y	L	C	F	A	A	L	L	M	A	G	L	D	G	I	K	N	K	I	H	P	G	E
Query Conservation																			.
Alig confidence		.	.																.
Template Conservation		.	.
Template Sequence		.	.	F	S	S	G	V	A	N	R	G	S	S	I	R	I	P	R	S	V	A	K	E	G	Y	G	Y	F	E	D	R	R	P	A	S	N	I	D	P	Y	L	V	T	G	I	M	C	E	T	V	C	G	A	I	D	N	A	D	M	T	K	E
Template Known Secondary structure		.	.						S		T	T	S	S											T										B	T	T																		B	T	T	B		T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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