Job Description P0A9C5 Confidence 100.00% Date Thu Jan 5 11:09:53 GMT 2012 Rank 1 Aligned Residues 468 % Identity 98% Template c1fpyE_ PDB info PDB header:ligase Chain: E: PDB Molecule:glutamine synthetase; PDBTitle: crystal structure of glutamine synthetase from salmonella2 typhimurium with inhibitor phosphinothricin Resolution 2.89 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	E	H	V	L	T	M	L	N	E	H	E	V	K	F	V	D	L	R	F	T	D	T	K	G	K	E	Q	H	V	T	I	P	A	H	Q	V	N	A	E	F	F	E	E	G	K	M	F	D	G	S	S	I	G	G	W	K	G	I	N	E	S	D	M	V	L	M	P	D	A	S	T	A	V	I	D	P	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	E	H	V	L	T	M	L	N	E	H	E	V	K	F	V	D	L	R	F	T	D	T	K	G	K	E	Q	H	V	T	I	P	A	H	Q	V	N	A	E	F	F	E	E	G	K	M	F	D	G	S	S	I	G	G	W	K	G	I	N	E	S	D	M	V	L	M	P	D	A	S	T	A	V	I	D	P	F	F
Template Known Secondary structure													T	T											S	S	S									G	G	G															T	T	S	T	T	T			T	T	T									G	G	G					S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	S	T	L	I	I	R	C	D	I	L	E	P	G	T	L	Q	G	Y	D	R	D	P	R	S	I	A	K	R	A	E	D	Y	L	R	S	T	G	I	A	D	T	V	L	F	G	P	E	P	E	F	F	L	F	D	D	I	R	F	G	S	S	I	S	G	S	H	V	A	I	D	D	I	E	G	A	W	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	S	T	L	I	I	R	C	D	I	L	E	P	G	T	L	Q	G	Y	D	R	D	P	R	S	I	A	K	R	A	E	D	Y	L	R	A	T	G	I	A	D	T	V	L	F	G	P	E	P	E	F	F	L	F	D	D	I	R	F	G	A	S	I	S	G	S	H	V	A	I	D	D	I	E	G	A	W	N	S
Template Known Secondary structure		S	S												T	T	T		S			T	T																T	T	S		S														S								T	T									T	T		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	Q	Y	E	G	G	N	K	G	H	R	P	A	V	K	G	G	Y	F	P	V	P	P	V	D	S	A	Q	D	I	R	S	E	M	C	L	V	M	E	Q	M	G	L	V	V	E	A	H	H	H	E	V	A	T	A	G	Q	N	E	V	A	T	R	F	N	T	M	T	K	K	A	D	E	I	Q	I	Y	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	K	Y	E	G	G	N	K	G	H	R	P	G	V	K	G	G	Y	F	P	V	P	P	V	D	S	A	Q	D	I	R	S	E	M	C	L	V	M	E	Q	M	G	L	V	V	E	A	H	H	H	E	V	A	T	A	G	Q	N	E	V	A	T	R	F	N	T	M	T	K	K	A	D	E	I	Q	I	Y	K	Y
Template Known Secondary structure		S				T	T									T	T	T		S	S			T	T	S	S	T	T														T	T										S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	H	N	V	A	H	R	F	G	K	T	A	T	F	M	P	K	P	M	F	G	D	N	G	S	G	M	H	C	H	M	S	L	S	K	N	G	V	N	L	F	A	G	D	K	Y	A	G	L	S	E	Q	A	L	Y	Y	I	G	G	V	I	K	H	A	K	A	I	N	A	L	A	N	P	T	T	N	S	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	H	N	V	A	H	R	F	G	K	T	A	T	F	M	P	K	P	M	F	G	D	N	G	S	G	M	H	C	H	M	S	L	A	K	N	G	T	N	L	F	S	G	D	K	Y	A	G	L	S	E	Q	A	L	Y	Y	I	G	G	V	I	K	H	A	K	A	I	N	A	L	A	N	P	T	T	N	S	Y	K
Template Known Secondary structure										T	T							S		S	S	S	S	S														T	T			T	T	B		S	S	G	G	G	B																							S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	V	P	G	Y	E	A	P	V	M	L	A	Y	S	A	R	N	R	S	A	S	I	R	I	P	V	V	S	S	P	K	A	R	R	I	E	V	R	F	P	D	P	A	A	N	P	Y	L	C	F	A	A	L	L	M	A	G	L	D	G	I	K	N	K	I	H	P	G	E	A	M	D	K	N	L	Y	D	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	V	P	G	Y	E	A	P	V	M	L	A	Y	S	A	R	N	R	S	A	S	I	R	I	P	V	V	A	S	P	K	A	R	R	I	E	V	R	F	P	D	P	A	A	N	P	Y	L	C	F	A	A	L	L	M	A	G	L	D	G	I	K	N	K	I	H	P	G	E	P	M	D	K	N	L	Y	D	L	P
Template Known Secondary structure			S	S	T	T	T	T									S	S		T	T									S	S	S	T	T										T	T	S																			T	T					S				S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	A	K	E	I	P	Q	V	A	G	S	L	E	E	A	L	N	E	L	D	L	D	R	E	F	L	K	A	G	G	V	F	T	D	E	A	I	D	A	Y	I	A	L	R	R	E	E	D	D	R	V	R	M	T	P	H	P	V	E	F	E	L	Y	Y	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	E	A	K	E	I	P	Q	V	A	G	S	L	E	E	A	L	N	A	L	D	L	D	R	E	F	L	K	A	G	G	V	F	T	D	E	A	I	D	A	Y	I	A	L	R	R	E	E	D	D	R	V	R	M	T	P	H	P	V	E	F	E	L	Y	Y	S	V
Template Known Secondary structure		T	T	S						B			S	S											T	T					G	G	G	S	S																						S										T	T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.