Return to main results Retrieve Phyre Job Id

Job DescriptionP39831
Confidence100.00%DateThu Jan 5 12:00:56 GMT 2012
Rank115Aligned Residues226
% Identity25%Templated2bd0a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20...... ...30.........40.... .....50.........60.........70.
Predicted Secondary structure 






.......


...













Query SS confidence 
























. . . . . . .

















. . .


























Query Sequence  IVLVTGATAGFGECITRRFIQQGHK. . . . . . . VIATGRRQERLQELKDEL. . . GDNLYIAQLDVRNRAAIEEMLASLPAE
Query Conservation 







 


 


  

  
  .......


  
            ...         
                 
Alig confidence 
























.......

















...


























Template Conservation 











   
  

  

        

   
                        
                 
Template Sequence  ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER
Template Known Secondary structure  TTTSTTT
TT

S
TTT


TTS
Template Predicted Secondary structure 







































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 






















































Query SS confidence 















































































Query Sequence  WCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATK
Query Conservation                                                                
            
  

Alig confidence 














.































































Template Conservation                 .                                             

            
 


Template Sequence  YGHIDCLVNNAGVGR. FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK
Template Known Secondary structure  TS

S





.


GGG

TT


GGGTS

TT
Template Predicted Secondary structure 














.















































Template SS confidence 















































































   84.....90........ .100.........110.........120.........130.........140.........150.........160..
 
   152.......160.........170.........180.........190.........200.........210.........220.. .......230
Predicted Secondary structure 

































.



Query SS confidence 






































































.







Query Sequence  AFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL. PAHVNINT
Query Conservation   

       
      




 
 

 
 
                          
 


  
 

 
 .   


  
Alig confidence 







































..........




















.







Template Conservation            
  
    



 
 

 
 
         ..........       

 

  
  
         
  
Template Sequence  FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE. . . . . . . . . . MQALMMMPEDIAAPVVQAYLQPSRTVVEEI
Template Known Secondary structure  TTTT

B
STTT



ST..........TGGGSB
TS
TT



Template Predicted Secondary structure 
















..........









Template SS confidence 















































































   163......170.........180.........190.........200.. .......210.........220.........230..
 
   231........
Predicted Secondary structure 


Query SS confidence 








Query Sequence  LEMMPVTQS
Query Conservation 
 
 
   
Alig confidence 
.






Template Conservation 
.
    
 
Template Sequence  I. LRPTSGD
Template Known Secondary structure  .

TT

Template Predicted Secondary structure  .



Template SS confidence 








   233 ......240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions